RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 RAB11AP62491 216 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 HNRNPA0Q13151 305 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 PCLAFQ15004 111 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 RAB30Q15771 203 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 RAB11BQ15907 218 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 UGCGQ16739 394 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 DCST1Q5T197 706 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 WDR88Q6ZMY6 472 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 RBM23Q86U06 439 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 LINC01551Q86U37 167 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 RBM45Q8IUH3 476 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CBLN2Q8IUK8 224 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 FUNDC1Q8IVP5 155 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 COMMD1Q8N668 190 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 GDPD1Q8N9F7 314 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 OR13D1Q8NGV5 346 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 OR10K1Q8NGX5 313 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SUSD6Q92537 303 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SLC38A4Q969I6 547 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TADA1Q96BN2 335 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CIPCQ9C0C6 399 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 MTMR10Q9NXD2 777 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 EXOC1LA0A1B0GW35 172 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 GABARAPO95166 117 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CST4P01036 141 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 C8GP07360 202 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 GPX2P18283 190 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ADORA2AP29274 412 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 RORCP51449 518 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ADARB1P78563 741 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 PTK6Q13882 451 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CLINT1Q14677 625 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 PTPN20Q4JDL3 420 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SLC25A53Q5H9E4 307 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF691Q5VV52 312 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ANKRD22Q5VYY1 191 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 MFSD9Q8NBP5 474 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 OR9Q1Q8NGQ5 310 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 OR1K1Q8NGR3 316 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 OR6K3Q8NGY3 331 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 RAB40AQ8WXH6 277 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 LRTOMTQ8WZ04 291 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TFGQ92734 400 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 HPDLQ96IR7 371 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SLC38A3Q99624 504 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 GPR20Q99678 358 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SRRQ9GZT4 340 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SLITRK2Q9H156 845 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SPAG4Q9NPE6 437 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CRLS1Q9UJA2 301 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 PSMD13Q9UNM6 376 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SLC7A11Q9UPY5 501 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TRAPPC4Q9Y296 219 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TSSC4Q9Y5U2 329 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 COL1A2P08123 1366 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM191CA6NGB0 347 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 DFFAO00273 331 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TRIM13O60858 407 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CELA2BP08218 269 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 LCP1P13796 627 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 EPORP19235 508 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 NPR2P20594 1047 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 AKAP5P24588 427 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 KLRC1P26715 233 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SLC6A6P31641 620 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 VIPR1P32241 457 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ART1P52961 327 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 POLR2LP62875 67 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 MRPS22P82650 360 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 IL18Q14116 193 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 UBAP2LQ14157 1087 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TAZQ16635 292 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 NRF1Q16656 503 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 LRRC26Q2I0M4 334 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CLEC16AQ2KHT3 1053 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 COL28A1Q2UY09 1125 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 UNC50Q53HI1 259 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TAPT1Q6NXT6 567 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 RTN4RL2Q86UN3 420 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 FBXO39Q8N4B4 442 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 FRMD1Q8N878 549 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 OR5B17Q8NGF7 314 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TFB1MQ8WVM0 346 aaKnown RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SELENOMQ8WWX9 145 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 OR5B2Q96R09 309 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF300Q96RE9 604 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 FAM118BQ9BPY3 351 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 KCTD14Q9BQ13 255 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 CCDC3Q9BQI4 270 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 FDXACB1Q9BRP7 624 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 FN3KRPQ9HA64 309 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 TPT1P8Q9HAU6 139 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 SLCO1B3Q9NPD5 702 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 DMAC2Q9NW81 257 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF282Q9UDV7 671 aaPredicted RBP4.5□□□□□ -1.69
NPHP3-206ENST00000474871 IKZF3Q9UKT9 509 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 ADAM18Q9Y3Q7 739 aa4.5□□□□□ -1.69
NPHP3-206ENST00000474871 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
NPHP3-206ENST00000474871 A0A1W2PQF6 199 aa4.49□□□□□ -1.69
NPHP3-206ENST00000474871 CDHR4A6H8M9 788 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms