RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CDS1Q92903 461 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 ZNF764Q96H86 408 aaPredicted RBP16.55■□□□□ 0.24
SORT1-203ENST00000471996 STACQ99469 402 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 PLK3Q9H4B4 646 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 ACSS3Q9H6R3 686 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 ZNF696Q9H7X3 374 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 SERINC1Q9NRX5 453 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 SERINC4A6NH21 518 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 EIF4E2O60573 245 aaKnown RBP16.54■□□□□ 0.24
SORT1-203ENST00000471996 RGS9O75916 674 aaPredicted RBP16.54■□□□□ 0.24
SORT1-203ENST00000471996 PDE5AO76074 875 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 WNT11O96014 354 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 OR4A8P0C604 315 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 PGCP20142 388 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 TAC1P20366 129 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 IMPDH1P20839 514 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 FRKP42685 505 aaPredicted RBP16.54■□□□□ 0.24
SORT1-203ENST00000471996 SLC16A1P53985 500 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 ATP12AP54707 1039 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 HILS1P60008 231 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 CBFBQ13951 182 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 ADIPOQQ15848 244 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 ZNF385BQ569K4 471 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 USP43Q70EL4 1123 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 RBM4Q9BWF3 364 aaKnown RBP16.54■□□□□ 0.24
SORT1-203ENST00000471996 SAP130Q9H0E3 1048 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 PIGUQ9H490 435 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 PCDHB10Q9UN67 800 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 UTP11Q9Y3A2 253 aaKnown RBP16.54■□□□□ 0.24
SORT1-203ENST00000471996 DTNAQ9Y4J8 743 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 PCDHB14Q9Y5E9 798 aa16.54■□□□□ 0.24
SORT1-203ENST00000471996 PKD1L1Q8TDX9 2849 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 A0A0G2JK05 382 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 B4DSR2 109 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 NPIPB9F8W1W9 429 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 ZNF264O43296 627 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 INHBAP08476 426 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 PHBP35232 272 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 CCR4P51679 360 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 FOXA1P55317 472 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 TGFBR3Q03167 851 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 RIN1Q13671 783 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 TRIP10Q15642 601 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 SYT14P1Q58G82 188 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 AWAT1Q58HT5 328 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 CDC73Q6P1J9 531 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 TRIM46Q7Z4K8 759 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 GLCCI1Q86VQ1 547 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 ZNF786Q8N393 782 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 TMCO5AQ8N6Q1 288 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 PIGXQ8TBF5 258 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 NEU4Q8WWR8 484 aaPredicted RBP16.53■□□□□ 0.24
SORT1-203ENST00000471996 ZHX1-C8orf76Q96EF9 292 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 CHMP6Q96FZ7 201 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 ACSS1Q9NUB1 689 aaPredicted RBP16.53■□□□□ 0.24
SORT1-203ENST00000471996 UPB1Q9UBR1 384 aa16.53■□□□□ 0.24
SORT1-203ENST00000471996 FBXO9Q9UK97 447 aaPredicted RBP16.53■□□□□ 0.24
SORT1-203ENST00000471996 HEATR1Q9H583 2144 aaKnown RBP16.52■□□□□ 0.24
SORT1-203ENST00000471996 TMPRSS2O15393 492 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 RSL1D1O76021 490 aaKnown RBP16.52■□□□□ 0.24
SORT1-203ENST00000471996 HMGN2P05204 90 aaKnown RBP16.52■□□□□ 0.24
SORT1-203ENST00000471996 SERPINB9P50453 376 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 ARFIP2P53365 341 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 CCNIQ14094 377 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 LASP1Q14847 261 aaKnown RBP16.52■□□□□ 0.24
SORT1-203ENST00000471996 CASP12Q6UXS9 341 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 ZNF614Q8N883 585 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 SLC25A43Q8WUT9 341 aaPredicted RBP16.52■□□□□ 0.24
SORT1-203ENST00000471996 ST8SIA1Q92185 356 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 FAM120BQ96EK7 910 aaKnown RBP16.52■□□□□ 0.24
SORT1-203ENST00000471996 SLC7A10Q9NS82 523 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 SPEF1Q9Y4P9 236 aa16.52■□□□□ 0.24
SORT1-203ENST00000471996 IGHV1-18A0A0C4DH31 117 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 NPIPB8E9PQR5 432 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 TBX19O60806 448 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 DNAJA2O60884 412 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 ERCC1P07992 297 aaPredicted RBP16.51■□□□□ 0.23
SORT1-203ENST00000471996 UBL4AP11441 157 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 LIMS1P48059 325 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 SESN3P58005 492 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 MERTKQ12866 999 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 KIAA0040Q15053 153 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 DCST2Q5T1A1 773 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 KLHL24Q6TFL4 600 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 CCDC103Q8IW40 242 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 SPATA4Q8NEY3 305 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 WDR60Q8WVS4 1066 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 PPCDCQ96CD2 204 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 NAPGQ99747 312 aaPredicted RBP16.51■□□□□ 0.23
SORT1-203ENST00000471996 KCNS3Q9BQ31 491 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 THUMPD3Q9BV44 507 aaKnown RBP16.51■□□□□ 0.23
SORT1-203ENST00000471996 KATNB1Q9BVA0 655 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 REEP4Q9H6H4 257 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 ZCCHC3Q9NUD5 404 aaKnown RBP16.51■□□□□ 0.23
SORT1-203ENST00000471996 SH3BP4Q9P0V3 963 aa16.51■□□□□ 0.23
SORT1-203ENST00000471996 KLF11O14901 512 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 DNPH1O43598 174 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 PMS2P2O95744 297 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 CRYAAP02489 173 aa16.5■□□□□ 0.23
SORT1-203ENST00000471996 TFPIP10646 304 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms