RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MMP11P24347 488 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 GDI1P31150 447 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 CD80P33681 288 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 RIPK4P57078 832 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 RPL23AP62750 156 aaKnown RBP2.7□□□□□ -1.98
BRCA2-202ENST00000470094 BEX3Q00994 111 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 DPYSL3Q14195 570 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 MXD4Q14582 209 aaPredicted RBP2.7□□□□□ -1.98
BRCA2-202ENST00000470094 LAGE3Q14657 143 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 CYP51A1Q16850 503 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 KCTD21Q4G0X4 260 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 ZNF57Q68EA5 555 aaPredicted RBP2.7□□□□□ -1.98
BRCA2-202ENST00000470094 OR8G2PQ6IF36 304 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 MOB1BQ7L9L4 216 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 C15orf54Q8N8G6 183 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 AKR7LQ8NHP1 331 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 AENQ8WTP8 325 aaKnown RBP2.7□□□□□ -1.98
BRCA2-202ENST00000470094 FRAT1Q92837 279 aaPredicted RBP2.7□□□□□ -1.98
BRCA2-202ENST00000470094 TMEM80Q96HE8 168 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 RPRD1AQ96P16 312 aaPredicted RBP2.7□□□□□ -1.98
BRCA2-202ENST00000470094 TSSK1BQ9BXA7 367 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 NMUR2Q9GZQ4 415 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 NXF5Q9H1B4 397 aaKnown RBP2.7□□□□□ -1.98
BRCA2-202ENST00000470094 SLC17A5Q9NRA2 495 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 SIGLEC8Q9NYZ4 499 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 LCMT1Q9UIC8 334 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 CDH9Q9ULB4 789 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 PDE10AQ9Y233 779 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 PIGLQ9Y2B2 252 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 POLDIP2Q9Y2S7 368 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 MEMO1Q9Y316 297 aa2.7□□□□□ -1.98
BRCA2-202ENST00000470094 LRRK1Q38SD2 2015 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 LRP5LA4QPB2 252 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 FAM47DPA6NHR8 397 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 SAGE2PA6NJ88 616 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 PCP4L1A6NKN8 68 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 SNTNA6NMZ2 147 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 NBR2O15453 112 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 TIMM8AO60220 97 aaPredicted RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 PGK1P00558 417 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 CD55P08174 381 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 NCF2P19878 526 aaPredicted RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 PTBP1P26599 531 aaKnown RBP eCLIP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 P2RY1P47900 373 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 EFNB2P52799 333 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 ATP5IP56385 69 aaPredicted RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 WNT4P56705 351 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 RIPPLY3P57055 190 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 SEC61GP60059 68 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 RPS8P62241 208 aaKnown RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 OTUD4Q01804 1114 aaKnown RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 ZNF154Q13106 437 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 C1orf61Q13536 156 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 CUL2Q13617 745 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 TIGITQ495A1 244 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 SFT2D3Q587I9 215 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 PDZK1Q5T2W1 519 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 WSCD1Q658N2 575 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 TFAP2EQ6VUC0 442 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 NBPF5PQ86XG9 351 aaPredicted RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 SLC22A9Q8IVM8 553 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 CEND1Q8N111 149 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 OR2T33Q8NG76 320 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 OR9A4Q8NGU2 314 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 ADAMTS16Q8TE57 1224 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 C16orf74Q96GX8 76 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 CCDC77Q9BR77 488 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 PARD6BQ9BYG5 372 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 ZNF702PQ9H963 129 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 PNO1Q9NRX1 252 aaKnown RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 IL36GQ9NZH8 169 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 ONECUT1Q9UBC0 465 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 AK6Q9Y3D8 172 aaKnown RBP2.69□□□□□ -1.98
BRCA2-202ENST00000470094 TIMM10BQ9Y5J6 103 aa2.69□□□□□ -1.98
BRCA2-202ENST00000470094 WI2-2373I1.2A0A1W2PRP0 233 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 CTAGE15A4D2H0 777 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 ARHGEF35A5YM69 484 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 HELTA6NFD8 242 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 OR52A4PA6NMU1 304 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 PP2D1A8MPX8 630 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 H3BMQ9 156 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 TSPAN12O95859 305 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 UQCRFS1P1P0C7P4 283 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 HSMCR30P0CW71 290 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 CYP2B6P20813 491 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 UGT1A3P35503 534 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 MAGEA8P43361 318 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 OR3A4PP47883 348 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SLC26A2P50443 739 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SUCLG1P53597 346 aaKnown RBP2.68□□□□□ -1.98
BRCA2-202ENST00000470094 DIO3P55073 304 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 LIM2P55344 173 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 CCNA1P78396 465 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 ST3GAL3Q11203 375 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 IDI1Q13907 227 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 NDUFA9Q16795 377 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 SBK1Q52WX2 424 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 TEX44Q53QW1 395 aa2.68□□□□□ -1.98
BRCA2-202ENST00000470094 BEND3Q5T5X7 828 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms