RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CLDN24A6NM45 220 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 ZNF716A6NP11 495 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 ZNF724A8MTY0 619 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 ETV2O00321 342 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-204ENST00000469207 NPHS1O60500 1241 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 LY6HO94772 140 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 TFPIP10646 304 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 CCNA2P20248 432 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 TTKP33981 857 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 RYKP34925 604 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 NUDT6P53370 316 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 SRSF2Q01130 221 aaKnown RBP10.8□□□□□ -0.68
HDAC3-204ENST00000469207 LSM12Q3MHD2 195 aaKnown RBP10.8□□□□□ -0.68
HDAC3-204ENST00000469207 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 OR4F3Q6IEY1 312 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 C11orf71Q6IPW1 123 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 ZNF525Q8N782 197 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 FNDC5Q8NAU1 212 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 OR10H5Q8NGA6 315 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 RAB8BQ92930 207 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 PPP1R36Q96LQ0 422 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 PPP3R2Q96LZ3 170 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 RHNO1Q9BSD3 238 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 TRMOQ9BU70 441 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 OR11A1Q9GZK7 315 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 MANSC1Q9H8J5 431 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 CTPS2Q9NRF8 586 aa10.8□□□□□ -0.68
HDAC3-204ENST00000469207 CIB4A0PJX0 185 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 CCT8L1PA6NM43 557 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 M0R1B8 84 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 DNAJA2O60884 412 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 CSTAP01040 98 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 OR12D1P0DN82 309 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 DDX5P17844 614 aaKnown RBP10.79□□□□□ -0.68
HDAC3-204ENST00000469207 COX5AP20674 150 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 MAPK1P28482 360 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 ZNF141Q15928 474 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 TMEM249Q2WGJ8 235 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 CHRFAM7AQ494W8 412 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 ATP6AP1LQ52LC2 224 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 AGAP6Q5VW22 663 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 FBXW9Q5XUX1 488 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 C3orf33Q6P1S2 294 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 SLC22A25Q6T423 547 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 MTDHQ86UE4 582 aaKnown RBP10.79□□□□□ -0.68
HDAC3-204ENST00000469207 ARIH2OSQ8N7S6 290 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 OR52E4Q8NGH9 312 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 SFXN5Q8TD22 340 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 XAGE5Q8WWM1 108 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 GRIP2Q9C0E4 1043 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 NMUR2Q9GZQ4 415 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 OR51I1Q9H343 314 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 L2HGDHQ9H9P8 463 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 ACER3Q9NUN7 267 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 POU2F3Q9UKI9 436 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 NOSIPQ9Y314 301 aaKnown RBP10.79□□□□□ -0.68
HDAC3-204ENST00000469207 SLC25A15Q9Y619 301 aa10.79□□□□□ -0.68
HDAC3-204ENST00000469207 YLPM1P49750 1951 aaKnown RBP10.79□□□□□ -0.68
HDAC3-204ENST00000469207 STAB1Q9NY15 2570 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 STX11O75558 287 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 LYPLA1O75608 230 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 KRT16P08779 473 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 PRPS1L1P21108 318 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 CD40P25942 277 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 PGM1P36871 562 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 RPL3P39023 403 aaKnown RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 FABP6P51161 128 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 PHC1P78364 1004 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 PLAURQ03405 335 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 RAB35Q15286 201 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 GABRA6Q16445 453 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 ARHGAP11BQ3KRB8 267 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 SYT14P1Q58G82 188 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 C6orf52Q5T4I8 152 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 ABLIM2Q6H8Q1 611 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 TYW3Q6IPR3 259 aaKnown RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 TNFAIP8L2Q6P589 184 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 ANKRD46Q86W74 232 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 ADGRG3Q86Y34 549 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 MUC15Q8N387 334 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 WDR31Q8NA23 367 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 KIF18AQ8NI77 898 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 TCP10LQ8TDR4 215 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 ST8SIA1Q92185 356 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 TUBGCP3Q96CW5 907 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 APOPT1Q96IL0 206 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 ADAD1Q96M93 576 aaKnown RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 TNFRSF13CQ96RJ3 184 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 KCNK17Q96T54 332 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 PRPF18Q99633 342 aaKnown RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 DHRS9Q9BPW9 319 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 USB1Q9BQ65 265 aaKnown RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 CCDC106Q9BWC9 280 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 BHLHE41Q9C0J9 482 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 BARX1Q9HBU1 254 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 EML4Q9HC35 981 aaKnown RBP10.78□□□□□ -0.68
HDAC3-204ENST00000469207 SERINC1Q9NRX5 453 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 CBLN4Q9NTU7 201 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 ATAD3AQ9NVI7 634 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 FAIMQ9NVQ4 179 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms