RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 FAM71CQ8NEG0 241 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 S100ZQ8WXG8 99 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 ADOQ96SZ5 270 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 MESP1Q9BRJ9 268 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 HOXD1Q9GZZ0 328 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 PALMDQ9NP74 551 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 FGF20Q9NP95 211 aaPredicted RBP16.75■□□□□ 0.27
COL9A3-205ENST00000466192 HINT3Q9NQE9 182 aaKnown RBP16.75■□□□□ 0.27
COL9A3-205ENST00000466192 MED17Q9NVC6 651 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 OCIAD1Q9NX40 245 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 TRAV27A0A087WT01 109 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 IGHV3-20A0A0C4DH32 117 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 GNB5O14775 395 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 OIP5O43482 229 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 RBM34P42696 430 aaKnown RBP16.75■□□□□ 0.27
COL9A3-205ENST00000466192 MLLT11Q13015 90 aaPredicted RBP16.75■□□□□ 0.27
COL9A3-205ENST00000466192 INAQ16352 499 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 THSD4Q6ZMP0 1018 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 CPOQ8IVL8 374 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 SLITRK4Q8IW52 837 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 OR4F15Q8NGB8 312 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 OR51A7Q8NH64 312 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 GFM1Q96RP9 751 aaKnown RBP16.75■□□□□ 0.27
COL9A3-205ENST00000466192 C6orf62Q9GZU0 229 aaPredicted RBP16.75■□□□□ 0.27
COL9A3-205ENST00000466192 WWTR1Q9GZV5 400 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 RACGAP1Q9H0H5 632 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 COPS7AQ9UBW8 275 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 PCNX3Q9H6A9 2034 aa16.75■□□□□ 0.27
COL9A3-205ENST00000466192 IRGMA1A4Y4 181 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 METTL15A6NJ78 407 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 PSMA1P25786 263 aaKnown RBP16.74■□□□□ 0.27
COL9A3-205ENST00000466192 ADH7P40394 386 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 NR0B1P51843 470 aaKnown RBP16.74■□□□□ 0.27
COL9A3-205ENST00000466192 DCAF7P61962 342 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 ZNF385CQ66K41 422 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-205ENST00000466192 ZNF527Q8NB42 609 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 RPS6KB2Q9UBS0 482 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 SIGLEC7Q9Y286 467 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 PNMA8CA0A1B0GUJ8 204 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 BHLHE40O14503 412 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 RCBTB2O95199 551 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 HPGDP15428 266 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 GPR143P51810 404 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 WNT4P56705 351 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 DBPQ10586 325 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-205ENST00000466192 NXNL2Q5VZ03 156 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 HLA-DQA1Q5Y7H0 255 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 PLBD1Q6P4A8 553 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 LHFPL3Q86UP9 236 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 PHC2Q8IXK0 858 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 MFSD4AQ8N468 514 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 PHOSPHO1Q8TCT1 267 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 GATAD2BQ8WXI9 593 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 NACC2Q96BF6 587 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 CDADC1Q9BWV3 514 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 MMP27Q9H306 513 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 NDUFB11Q9NX14 153 aa16.74■□□□□ 0.27
COL9A3-205ENST00000466192 H2AFY2Q9P0M6 372 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-205ENST00000466192 KIF26BQ2KJY2 2108 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 IDSB3KWA1 339 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 SCDO00767 359 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 SOCS6O14544 535 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 GDF9O60383 454 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 ICOSLGO75144 302 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 REM1O75628 298 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 SYPP08247 313 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 DCDP81605 110 aaKnown RBP16.73■□□□□ 0.27
COL9A3-205ENST00000466192 SKP2Q13309 424 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 CBLN3Q6UW01 205 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 B3GLCTQ6Y288 498 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 CXXC5Q7LFL8 322 aaKnown RBP16.73■□□□□ 0.27
COL9A3-205ENST00000466192 PPP1R3BQ86XI6 285 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 OIT3Q8WWZ8 545 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 IFT27Q9BW83 186 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 MED20Q9H944 212 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 MRTO4Q9UKD2 239 aaKnown RBP16.73■□□□□ 0.27
COL9A3-205ENST00000466192 SPIN1Q9Y657 262 aaPredicted RBP16.73■□□□□ 0.27
COL9A3-205ENST00000466192 EXPH5Q8NEV8 1989 aa16.73■□□□□ 0.27
COL9A3-205ENST00000466192 D6RAR5 112 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 BOLA2-SMG1P6H3BVE0 249 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 TO15178 435 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 PTP4A3O75365 173 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 LIMS3P0CW19 117 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 LIMS4P0CW20 117 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 UBL4AP11441 157 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 ENDOUP21128 410 aaKnown RBP16.72■□□□□ 0.27
COL9A3-205ENST00000466192 HTR1FP30939 366 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 ATP6V1E1P36543 226 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 CRYBB2P43320 205 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL9A3-205ENST00000466192 CRYZQ08257 329 aaKnown RBP16.72■□□□□ 0.27
COL9A3-205ENST00000466192 TMEM44Q2T9K0 475 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 SLC29A4Q7RTT9 530 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 SNX29P2Q8IUI4 249 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 ZNF440Q8IYI8 595 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 LNX2Q8N448 690 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 ZBTB44Q8NCP5 570 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 TRMT61AQ96FX7 289 aaKnown RBP16.72■□□□□ 0.27
COL9A3-205ENST00000466192 CTRCQ99895 268 aa16.72■□□□□ 0.27
COL9A3-205ENST00000466192 RTN4RQ9BZR6 473 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms