RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 GLI4P10075 376 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 UMPSP11172 480 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 PEPDP12955 493 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 IL7RP16871 459 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 PRKCAP17252 672 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 AGAP20933 346 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 EIF1P41567 113 aaKnown RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 GSK3BP49841 420 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 EEF1A1P68104 462 aaKnown RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 RBBP4Q09028 425 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 ZSWIM7Q19AV6 140 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 ACSF3Q4G176 576 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 RPS26P11Q5JNZ5 115 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 C1orf185Q5T7R7 199 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 INTS11Q5TA45 600 aaKnown RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 RAET1LQ5VY80 246 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 SP5Q6BEB4 398 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 RPTNQ6XPR3 784 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 SEM1Q6ZVN7 128 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 NCCRP1Q6ZVX7 275 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 CALHM3Q86XJ0 350 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 VRK2Q86Y07 508 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 GRAMD2AQ8IUY3 354 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 OR5M1Q8NGP8 315 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 OR52P1PQ8NH57 321 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 NFKBIDQ8NI38 313 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 BBS10Q8TAM1 723 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 SLC26A7Q8TE54 656 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 WDR60Q8WVS4 1066 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 ITLN2Q8WWU7 325 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 CNOT9Q92600 299 aaKnown RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 VCX3BQ9H321 246 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 CALHM2Q9HA72 323 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 CMTM6Q9NX76 183 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 DNAJB12Q9NXW2 375 aaKnown RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 VDAC3Q9Y277 283 aa12.74□□□□□ -0.37
SREBF1-207ENST00000447641 GPC6Q9Y625 555 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-207ENST00000447641 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 CD8B2A6NJW9 211 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 PRSS44E7EML9 344 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 FAAHO00519 579 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 GCM2O75603 506 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 IFNA14P01570 189 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 GPIP06744 558 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 TCN1P20061 433 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 TCEA1P23193 301 aaKnown RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 SUCLG1P53597 346 aaKnown RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 PCBP3P57721 371 aaKnown RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 NUP107P57740 925 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 PMPCAQ10713 525 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 CBFBQ13951 182 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 QPRTQ15274 297 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 SF3B4Q15427 424 aaKnown RBP eCLIP12.73□□□□□ -0.379e-10■■■■■ 33.6
SREBF1-207ENST00000447641 RABL3Q5HYI8 236 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 MRPL2Q5T653 305 aaKnown RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 RNF220Q5VTB9 566 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 NSUN5P2Q63ZY6 315 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 LCN8Q6JVE9 175 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 B3GNT6Q6ZMB0 384 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 SPATA24Q86W54 205 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 ZZZ3Q8IYH5 903 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 CLIP4Q8N3C7 705 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 BHLHE22Q8NFJ8 381 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 OR52E4Q8NGH9 312 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 ST8SIA1Q92185 356 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 MRGPRX4Q96LA9 322 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 RNF145Q96MT1 663 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 TUBA1CQ9BQE3 449 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 RNPEPL1Q9HAU8 725 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 RLIMQ9NVW2 624 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 STOML1Q9UBI4 398 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF232Q9UNY5 417 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 CAMK2AQ9UQM7 478 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 ZNF443Q9Y2A4 671 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-207ENST00000447641 IFT52Q9Y366 437 aa12.73□□□□□ -0.37
SREBF1-207ENST00000447641 KDM4EB2RXH2 506 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-207ENST00000447641 C5orf58C9J3I9 102 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 FAM47E-STBD1D6RA91 191 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 TOXO94900 526 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 PABPC4LP0CB38 370 aaKnown RBP12.72□□□□□ -0.37
SREBF1-207ENST00000447641 FCGR1AP12314 374 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 PGCP20142 388 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 IL11P20809 199 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 ELK4P28324 431 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-207ENST00000447641 TIMP3P35625 211 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 ACAA2P42765 397 aaKnown RBP12.72□□□□□ -0.37
SREBF1-207ENST00000447641 SLC6A8P48029 635 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 CLDN20P56880 219 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 SESN3P58005 492 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 RAC1P63000 192 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 FOXF1Q12946 379 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 SCARB2Q14108 478 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 VEZF1Q14119 521 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 LARS2Q15031 903 aaKnown RBP12.72□□□□□ -0.37
SREBF1-207ENST00000447641 FXNQ16595 210 aa12.72□□□□□ -0.37
SREBF1-207ENST00000447641 LIN52Q52LA3 116 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms