RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 TAGLN3Q9UI15 199 aa16.3■□□□□ 0.2
LRCH1-204ENST00000443945 ZNF443Q9Y2A4 671 aaPredicted RBP16.3■□□□□ 0.2
LRCH1-204ENST00000443945 IFT52Q9Y366 437 aa16.3■□□□□ 0.2
LRCH1-204ENST00000443945 GPC6Q9Y625 555 aaPredicted RBP16.3■□□□□ 0.2
LRCH1-204ENST00000443945 AP4B1Q9Y6B7 739 aa16.3■□□□□ 0.2
LRCH1-204ENST00000443945 INTS1Q8N201 2190 aaKnown RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 MED12LQ86YW9 2145 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 A0A0J9YW62 118 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 MBD3L4A6NDZ8 208 aaPredicted RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 MBD3L3A6NE82 208 aaPredicted RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 MBD3L5A6NJ08 208 aaPredicted RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 CYSRT1A8MQ03 144 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 FRS3O43559 492 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 PABPC4LP0CB38 370 aaKnown RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 ME2P23368 584 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 CEACAM8P31997 349 aaPredicted RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 RBBP4Q09028 425 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 PON3Q15166 354 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 CTU2Q2VPK5 515 aaKnown RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 RIPPLY2Q5TAB7 128 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 CMIPQ8IY22 773 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 LILRB4Q8NHJ6 448 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 MBD3L2Q8NHZ7 208 aaPredicted RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 INTS12Q96CB8 462 aaKnown RBP16.29■□□□□ 0.2
LRCH1-204ENST00000443945 CALHM2Q9HA72 323 aa16.29■□□□□ 0.2
LRCH1-204ENST00000443945 hCG_2014768A0A024R1R8 64 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 LINC01387J3KSC0 135 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 SERPINB7O75635 380 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 ETS2P15036 469 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 PGCP20142 388 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 TIMP3P35625 211 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 EIF1P41567 113 aaKnown RBP16.28■□□□□ 0.2
LRCH1-204ENST00000443945 RAC1P63000 192 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 MXRA7P84157 204 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 SGCBQ16585 318 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 ARPINQ7Z6K5 226 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 ZZZ3Q8IYH5 903 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 OR10D3Q8NH80 312 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 ASB5Q8WWX0 329 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 SPATA5L1Q9BVQ7 753 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 CDHR4A6H8M9 788 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 CXCL13O43927 109 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 DNAJA2O60884 412 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 NTN1O95631 604 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 PRG2P13727 222 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 IDH2P48735 452 aaKnown RBP16.28■□□□□ 0.2
LRCH1-204ENST00000443945 SLC7A2P52569 658 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 EEF1A1P68104 462 aaKnown RBP16.28■□□□□ 0.2
LRCH1-204ENST00000443945 HOXC5Q00444 222 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 MERTKQ12866 999 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 SF3B4Q15427 424 aaKnown RBP eCLIP16.28■□□□□ 0.2
LRCH1-204ENST00000443945 VMACQ2NL98 169 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 TMEM176BQ3YBM2 270 aaPredicted RBP16.28■□□□□ 0.2
LRCH1-204ENST00000443945 COMTD1Q86VU5 262 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 SLC15A3Q8IY34 581 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 RELL2Q8NC24 303 aaPredicted RBP16.28■□□□□ 0.2
LRCH1-204ENST00000443945 ADGRG7Q96K78 797 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 MRGPRX4Q96LA9 322 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 ZNF583Q96ND8 569 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 GPATCH1Q9BRR8 931 aaKnown RBP16.28■□□□□ 0.2
LRCH1-204ENST00000443945 CMTM6Q9NX76 183 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 USP22Q9UPT9 525 aa16.28■□□□□ 0.2
LRCH1-204ENST00000443945 PKDREJQ9NTG1 2253 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 SLC22A20A6NK97 555 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 M0QX08 132 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 THBS1P07996 1170 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 CCNA2P20248 432 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 SLC6A8P48029 635 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 GZMMP51124 257 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 SP5Q6BEB4 398 aaPredicted RBP16.27■□□□□ 0.2
LRCH1-204ENST00000443945 NET1Q7Z628 596 aaPredicted RBP16.27■□□□□ 0.2
LRCH1-204ENST00000443945 EGFL6Q8IUX8 553 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 OR2T12Q8NG77 320 aa16.27■□□□□ 0.2
LRCH1-204ENST00000443945 RAB3IPQ96QF0 476 aaPredicted RBP16.27■□□□□ 0.2
LRCH1-204ENST00000443945 ITPR2Q14571 2701 aa16.27■□□□□ 0.19
LRCH1-204ENST00000443945 A0A1W2PNR3 127 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 HSPB2A8KAH6 182 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 AQP8O94778 261 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 OPN1SWP03999 348 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 PSME3P61289 254 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 SNTB1Q13884 538 aaKnown RBP16.26■□□□□ 0.19
LRCH1-204ENST00000443945 HSPB2Q16082 182 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 INTS11Q5TA45 600 aaKnown RBP16.26■□□□□ 0.19
LRCH1-204ENST00000443945 HACD2Q6Y1H2 254 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 PLEKHM3Q6ZWE6 761 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 P4HA3Q7Z4N8 544 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 ARMC8Q8IUR7 673 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 SMYD1Q8NB12 490 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 SLC26A7Q8TE54 656 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 WNT2BQ93097 391 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 REXO5Q96IC2 774 aaKnown RBP16.26■□□□□ 0.19
LRCH1-204ENST00000443945 KLHL15Q96M94 604 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 SPATA9Q9BWV2 254 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 EXOSC3Q9NQT5 275 aaKnown RBP16.26■□□□□ 0.19
LRCH1-204ENST00000443945 CTPS2Q9NRF8 586 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 ADA2Q9NZK5 511 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 STOML1Q9UBI4 398 aa16.26■□□□□ 0.19
LRCH1-204ENST00000443945 KLF2Q9Y5W3 355 aaPredicted RBP16.26■□□□□ 0.19
LRCH1-204ENST00000443945 TACC2O95359 2948 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms