RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 CLDN20P56880 219 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 TRAP1Q12931 704 aaKnown RBP15.93■□□□□ 0.14
CCDC188-201ENST00000439765 INTS11Q5TA45 600 aaKnown RBP15.93■□□□□ 0.14
CCDC188-201ENST00000439765 AP1ARQ63HQ0 302 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 ZNF295-AS1Q8N0V1 137 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 GTPBP8Q8N3Z3 284 aaPredicted RBP15.93■□□□□ 0.14
CCDC188-201ENST00000439765 NAXEQ8NCW5 288 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 TOR1AIP2Q8NFQ8 470 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 OR5W2Q8NH69 310 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 WDR60Q8WVS4 1066 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 SPOCK3Q9BQ16 436 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 TREX2Q9BQ50 279 aaPredicted RBP15.93■□□□□ 0.14
CCDC188-201ENST00000439765 ENKD1Q9H0I2 346 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 MUC13Q9H3R2 512 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 BCL2L10Q9HD36 194 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 CALML5Q9NZT1 146 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 ACTR3BQ9P1U1 418 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 ANGPT4Q9Y264 503 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 SLC35A3Q9Y2D2 325 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 SNX13Q9Y5W8 968 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 DSPPQ9NZW4 1301 aa15.93■□□□□ 0.14
CCDC188-201ENST00000439765 ANKHD1Q8IWZ3 2542 aaKnown RBP15.92■□□□□ 0.14
CCDC188-201ENST00000439765 A0A0G2JPF8 293 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 C7orf72A4D263 438 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 HNRNPCL2B2RXH8 293 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 HNRNPCL3B7ZW38 293 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 ACOT8O14734 319 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 EIF4E2O60573 245 aaKnown RBP15.92■□□□□ 0.14
CCDC188-201ENST00000439765 GMNNO75496 209 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 GCM2O75603 506 aaPredicted RBP15.92■□□□□ 0.14
CCDC188-201ENST00000439765 PGM3O95394 542 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 HNRNPCL4P0DMR1 293 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 NCK1P16333 377 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 IL7RP16871 459 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 RPS4Y1P22090 263 aaKnown RBP15.92■□□□□ 0.14
CCDC188-201ENST00000439765 CHRNB4P30926 498 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 PCBP3P57721 371 aaKnown RBP15.92■□□□□ 0.14
CCDC188-201ENST00000439765 PLAURQ03405 335 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 CBFBQ13951 182 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 NSUN5P2Q63ZY6 315 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 CCDC80Q76M96 950 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 MEIOBQ8N635 442 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 FAM71CQ8NEG0 241 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 BBS10Q8TAM1 723 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 POC1BQ8TC44 478 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 ZPLD1Q8TCW7 415 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 GPR119Q8TDV5 335 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 ASB5Q8WWX0 329 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 OIT3Q8WWZ8 545 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 FIG4Q92562 907 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 ZNF524Q96C55 264 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 LAT2Q9GZY6 243 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 GORASP2Q9H8Y8 452 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 MAGEL2Q9UJ55 1249 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 MED13LQ71F56 2210 aa15.92■□□□□ 0.14
CCDC188-201ENST00000439765 LINC01387J3KSC0 135 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 ARPC2O15144 300 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 CIB2O75838 187 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 OPN1LWP04000 364 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 PRKCAP17252 672 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 IL11P20809 199 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 PSMA4P25789 261 aaKnown RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 KDELR2P33947 212 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 SUCLG1P53597 346 aaKnown RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 CLDN15P56746 228 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 KCNJ10P78508 379 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 QPRTQ15274 297 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 SF3B4Q15427 424 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 RIPPLY2Q5TAB7 128 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 GGNQ86UU5 652 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 PEX5LQ8IYB4 626 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 MTHFD2LQ9H903 347 aaPredicted RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 AP4B1Q9Y6B7 739 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 NKX2-6A6NCS4 301 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 MBD3L4A6NDZ8 208 aaPredicted RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 MBD3L3A6NE82 208 aaPredicted RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 MBD3L5A6NJ08 208 aaPredicted RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 CD8B2A6NJW9 211 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 M0QX08 132 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 DBIP07108 87 aaKnown RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 NID1P14543 1247 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 ETS2P15036 469 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 AQP1P29972 269 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 SSTR2P30874 369 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 RYKP34925 604 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 SFTPDP35247 375 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 BCL2A1Q16548 175 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 MRPL2Q5T653 305 aaKnown RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 CHMP1BQ7LBR1 199 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 PATL1Q86TB9 770 aaKnown RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 DHFR2Q86XF0 187 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 VRK2Q86Y07 508 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 GRAMD2AQ8IUY3 354 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 C9orf106Q8NAJ2 232 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 OR52P1PQ8NH57 321 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 MBD3L2Q8NHZ7 208 aaPredicted RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 CNOT9Q92600 299 aaKnown RBP15.91■□□□□ 0.14
CCDC188-201ENST00000439765 PMM1Q92871 262 aa15.91■□□□□ 0.14
CCDC188-201ENST00000439765 C14orf79Q96F83 325 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms