RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SYT14P1Q58G82 188 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 BEX5Q5H9J7 111 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 KRTAP1-3Q8IUG1 177 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 SLC43A2Q8N370 569 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ARFGAP2Q8N6H7 521 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 GLB1L3Q8NCI6 653 aaPredicted RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 OIT3Q8WWZ8 545 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 CNOT9Q92600 299 aaKnown RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 S100PBPQ96BU1 408 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 OR52B2Q96RD2 323 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ING1Q9UK53 422 aaPredicted RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 GPR52Q9Y2T5 361 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ARID1AO14497 2285 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ROS1P08922 2347 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 NF1P21359 2839 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 RFXANKO14593 260 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 AP3D1O14617 1153 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 SLC22A3O75751 556 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 YES1P07947 543 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 LRRC74AQ0VAA2 488 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 RASGEF1BQ0VAM2 473 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 ACKR1Q16570 336 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 GABRG1Q8N1C3 465 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 OR9I1Q8NGQ6 314 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 PIWIL2Q8TC59 973 aaKnown RBP16.35■□□□□ 0.21
PSPC1-202ENST00000427943 ZNF775Q96BV0 537 aaPredicted RBP16.35■□□□□ 0.21
PSPC1-202ENST00000427943 TRNT1Q96Q11 434 aaKnown RBP16.35■□□□□ 0.21
PSPC1-202ENST00000427943 CCL19Q99731 98 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 CCDC106Q9BWC9 280 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 GP6Q9HCN6 339 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 DLL4Q9NR61 685 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 KLHL9Q9P2J3 617 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 LIPT1Q9Y234 373 aa16.35■□□□□ 0.21
PSPC1-202ENST00000427943 SULT2B1O00204 365 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 CYTIPO60759 359 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 PLAUP00749 431 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 NR2F1P10589 423 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 CCNA2P20248 432 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 IL32P24001 234 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 EDNRAP25101 427 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 HOXC12P31275 282 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 NKX6-1P78426 367 aaPredicted RBP16.34■□□□□ 0.21
PSPC1-202ENST00000427943 GTDC1Q4AE62 458 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 AP1ARQ63HQ0 302 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 ZNF704Q6ZNC4 412 aaPredicted RBP16.34■□□□□ 0.21
PSPC1-202ENST00000427943 LRRC74BQ6ZQY2 392 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 GRINAQ7Z429 371 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 STEAP2Q8NFT2 490 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 SLC25A43Q8WUT9 341 aaPredicted RBP16.34■□□□□ 0.21
PSPC1-202ENST00000427943 WDR60Q8WVS4 1066 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 ZNF75CPQ92670 426 aaPredicted RBP16.34■□□□□ 0.21
PSPC1-202ENST00000427943 PLPPR2Q96GM1 343 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 TACO1Q9BSH4 297 aaKnown RBP16.34■□□□□ 0.21
PSPC1-202ENST00000427943 OR11A1Q9GZK7 315 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 BCO1Q9HAY6 547 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 EXOSC3Q9NQT5 275 aaKnown RBP16.34■□□□□ 0.21
PSPC1-202ENST00000427943 CHRNA9Q9UGM1 479 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 PRSS50Q9UI38 385 aa16.34■□□□□ 0.21
PSPC1-202ENST00000427943 SPIN1Q9Y657 262 aaPredicted RBP16.34■□□□□ 0.21
PSPC1-202ENST00000427943 AGAP5A6NIR3 686 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 ZNF814B7Z6K7 855 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 KLF11O14901 512 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 UBDO15205 165 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 SMPD2O60906 423 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 ANP32DO95626 131 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 KRT75O95678 551 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 ADAP00813 363 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 IL6P05231 212 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 FPR1P21462 350 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 APOBEC1P41238 236 aaKnown RBP16.33■□□□□ 0.2
PSPC1-202ENST00000427943 IDH2P48735 452 aaKnown RBP16.33■□□□□ 0.2
PSPC1-202ENST00000427943 CSNK2A1P68400 391 aaPredicted RBP16.33■□□□□ 0.2
PSPC1-202ENST00000427943 GSTA3Q16772 222 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 SFRP5Q5T4F7 317 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 MRPL2Q5T653 305 aaKnown RBP16.33■□□□□ 0.2
PSPC1-202ENST00000427943 ABLIM2Q6H8Q1 611 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 TMPPEQ6ZT21 453 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 AURKBQ96GD4 344 aaPredicted RBP16.33■□□□□ 0.2
PSPC1-202ENST00000427943 ARL5BQ96KC2 179 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 OR10A4Q9H209 315 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 GSX1Q9H4S2 264 aaPredicted RBP16.33■□□□□ 0.2
PSPC1-202ENST00000427943 SDR39U1Q9NRG7 319 aaPredicted RBP16.33■□□□□ 0.2
PSPC1-202ENST00000427943 ZIM2Q9NZV7 527 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 USH1CQ9Y6N9 552 aa16.33■□□□□ 0.2
PSPC1-202ENST00000427943 ETFAP13804 333 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 IL7RP16871 459 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 RPS4Y1P22090 263 aaKnown RBP16.32■□□□□ 0.2
PSPC1-202ENST00000427943 CRATP43155 626 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 OR3A2P47893 321 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 MVDP53602 400 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 NR1H2P55055 460 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 TXNL4AP83876 142 aaKnown RBP16.32■□□□□ 0.2
PSPC1-202ENST00000427943 MAPK11Q15759 364 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 Q5PR19 223 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 AGBL2Q5U5Z8 902 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 C20orf204Q6ZNR8 217 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 P3H2Q8IVL5 708 aa16.32■□□□□ 0.2
PSPC1-202ENST00000427943 KISS1RQ969F8 398 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms