RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CXCR1P25024 350 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 ELK4P28324 431 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 TACR3P29371 465 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 POLR2HP52434 150 aaKnown RBP13.95□□□□□ -0.18
COL11A1-204ENST00000427239 ST3GAL3Q11203 375 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 NFATC3Q12968 1075 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.18
COL11A1-204ENST00000427239 ALG10BQ5I7T1 473 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 ZFP1Q6P2D0 407 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 HEATR5AQ86XA9 2040 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 NEIL3Q8TAT5 605 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 C3orf49Q96BT1 292 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 MPP4Q96JB8 637 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 PIP5K1AQ99755 562 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 FNDC11Q9BVV2 318 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 PLSCR2Q9NRY7 297 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 OSGIN1Q9UJX0 560 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 NPIPA1Q9UND3 350 aa13.95□□□□□ -0.18
COL11A1-204ENST00000427239 TRGV5A0A0B4J1U4 118 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 A0A1B0GVC2 190 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 OR2M5A3KFT3 312 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 ACTL6AO96019 429 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 YAP1P46937 504 aaKnown RBP13.94□□□□□ -0.18
COL11A1-204ENST00000427239 CDH12P55289 794 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 GFRA1P56159 465 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 SMIM11AP58511 58 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 B3GALT5-AS1P59052 145 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 FOXF1Q12946 379 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 NHSL2Q5HYW2 709 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 ADGRG3Q86Y34 549 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 POC1BQ8TC44 478 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 SLCO4A1Q96BD0 722 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 SLC41A3Q96GZ6 507 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 SFXN2Q96NB2 322 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 CTPS2Q9NRF8 586 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 NTNG1Q9Y2I2 539 aa13.94□□□□□ -0.18
COL11A1-204ENST00000427239 J3KTA2 159 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 FFAR1O14842 300 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 HNRNPRO43390 633 aaKnown RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 CHP2O43745 196 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 FKBP6O75344 327 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ENTPD5O75356 428 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 KRT36O76013 467 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 PRSS23O95084 383 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 FOXK1P85037 733 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ARHGAP11AQ6P4F7 1023 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 TRILQ7L0X0 811 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ATG4DQ86TL0 474 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 TSPYL5Q86VY4 417 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 OFCC1Q8IZS5 231 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 GPR137Q96N19 417 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ANKRD19PQ9H560 264 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 EXO5Q9H790 373 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 NMNAT1Q9HAN9 279 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 CHRNA9Q9UGM1 479 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 SLC7A7Q9UM01 511 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ZNF337Q9Y3M9 751 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 SPIN1Q9Y657 262 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 AP4B1Q9Y6B7 739 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 SMG1Q96Q15 3661 aaKnown RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 PCNX3Q9H6A9 2034 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 A0A087WUJ7 227 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 A0A1W2PRQ8 180 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ELOA3DA6NLF2 546 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ADAMDEC1O15204 470 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ZNF208O43345 1280 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 CLK1P49759 484 aaKnown RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 RAC1P63000 192 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 DGCR6Q14129 220 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ELOA3BQ3SY89 546 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 C3orf33Q6P1S2 294 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 LINC00114Q6XXX2 140 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 GDF7Q7Z4P5 450 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 GHDCQ8N2G8 530 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ELOA3Q8NG57 546 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 SLC25A43Q8WUT9 341 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 STMN2Q93045 179 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ABTB1Q969K4 478 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 NPAS1Q99742 590 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 SLX1AQ9BQ83 275 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 TSPAN10Q9H1Z9 355 aaPredicted RBP13.93□□□□□ -0.18
COL11A1-204ENST00000427239 SLC6A15Q9H2J7 730 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 ASF1BQ9NVP2 202 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
COL11A1-204ENST00000427239 GJE1A6NN92 205 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 SHISA8B8ZZ34 492 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 EFNA2O43921 213 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 DIRAS1O95057 198 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 CST1P01037 141 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 MT-ND1P03886 318 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 THY1P04216 161 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 H1F0P07305 194 aaKnown RBP13.92□□□□□ -0.18
COL11A1-204ENST00000427239 TCEA1P23193 301 aaKnown RBP13.92□□□□□ -0.18
COL11A1-204ENST00000427239 HMGA2P52926 109 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 SELENBP1Q13228 472 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 COLEC12Q5KU26 742 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 VASNQ6EMK4 673 aa13.92□□□□□ -0.18
COL11A1-204ENST00000427239 OR2T5Q6IEZ7 315 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms