RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 SLC16A1P53985 500 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 YBEYP58557 167 aaPredicted RBP6.38□□□□□ -1.39
CNOT4-205ENST00000423368 ERVPABLB-1P60509 514 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 LSM11P83369 360 aaKnown RBP eCLIP6.38□□□□□ -1.39
CNOT4-205ENST00000423368 CACNG1Q06432 222 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
CNOT4-205ENST00000423368 ISXQ2M1V0 245 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 GOLGA7BQ2TAP0 167 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF667Q5HYK9 610 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 SLC35D3Q5M8T2 416 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 NSUN5P2Q63ZY6 315 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 NCEH1Q6PIU2 408 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 PAQR3Q6TCH7 311 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 FJX1Q86VR8 437 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 ARMC10Q8N2F6 343 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 RNF175Q8N4F7 328 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 OR10AD1Q8NGE0 317 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 ANAPC16Q96DE5 110 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 PACRGQ96M98 296 aaPredicted RBP6.38□□□□□ -1.39
CNOT4-205ENST00000423368 SULT4A1Q9BR01 284 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 BARX1Q9HBU1 254 aaPredicted RBP6.38□□□□□ -1.39
CNOT4-205ENST00000423368 IL36AQ9UHA7 158 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 GJD2Q9UKL4 321 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 GAB2Q9UQC2 676 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 NEUROG3Q9Y4Z2 214 aa6.38□□□□□ -1.39
CNOT4-205ENST00000423368 A0A087WV62 115 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SMCO3A2RU48 225 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SLC38A8A6NNN8 435 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 KDM4EB2RXH2 506 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 MED7O43513 233 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ECI2O75521 394 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 DGAT1O75907 488 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 EDN1P05305 212 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 BCHEP06276 602 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 UBBP0CG47 229 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 F3P13726 295 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 XPAP23025 273 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TACR1P25103 407 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 KIR3DL2P43630 455 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 AIMP2Q13155 320 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 MTMR1Q13613 665 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CEBPEQ15744 281 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TOMM34Q15785 309 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 C9orf64Q5T6V5 341 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZC3H14Q6PJT7 736 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 C19orf48Q6RUI8 117 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 FAM111BQ6SJ93 734 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ARL9Q6T311 187 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SCD5Q86SK9 330 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CLECL1Q8IZS7 167 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 FAM169BQ8N8A8 192 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR8J3Q8NGG0 315 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR2L8Q8NGY9 312 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ARL11Q969Q4 196 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CYP2S1Q96SQ9 504 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CDCA3Q99618 268 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ACPTQ9BZG2 426 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 RAB33BQ9H082 229 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CXCL16Q9H2A7 254 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CCDC86Q9H6F5 360 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TUBA4BQ9H853 241 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PLCXD1Q9NUJ7 323 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PARPBPQ9NWS1 579 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 UPB1Q9UBR1 384 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF282Q9UDV7 671 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 AAR2Q9Y312 384 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 NPFFR2Q9Y5X5 522 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PUS1Q9Y606 427 aaKnown RBP eCLIP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 USP3Q9Y6I4 520 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 WASH4PA8MWX3 477 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 A8MXE2 369 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PYCARD-AS1I3L0S3 204 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 K7EPK0 472 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 M0R143 59 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CLIC1O00299 241 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TNFSF12O43508 249 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TSPAN6O43657 245 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CIDEAO60543 219 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 FBXO24O75426 580 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SOD1P00441 154 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 F13BP05160 661 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CLTBP09497 229 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ACVR1BP36896 505 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CDX1P47902 265 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 GSK3AP49840 483 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 RENBPP51606 427 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PTTG1IPP53801 180 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PCBP4P57723 403 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 DCDP81605 110 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZP2Q05996 745 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ABHD18Q0P651 414 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 COL13A1Q5TAT6 717 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 FAM46CQ5VWP2 391 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 B3GNTL1Q67FW5 361 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SWSAP1Q6NVH7 229 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 FAHD1Q6P587 224 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PTOV1Q86YD1 416 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CNTN4Q8IWV2 1026 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms