RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NUDT1P36639 197 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 ASMTP46597 345 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 PPOXP50336 477 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 IL24Q13007 206 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 UNC119Q13432 240 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 CYB5R2Q6BCY4 276 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 NIPAL3Q6P499 406 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 AFTPHQ6ULP2 937 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 MISPQ8IVT2 679 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR9A1PQ8NGU1 263 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 SELENOMQ8WWX9 145 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 VPS35Q96QK1 796 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 TBX15Q96SF7 602 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 NRTNQ99748 197 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 KLHDC3Q9BQ90 382 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 ANP32EQ9BTT0 268 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZSCAN5AQ9BUG6 496 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 MAGT1Q9H0U3 335 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 NARFLQ9H6Q4 476 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 DHX33Q9H6R0 707 aaKnown RBP2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 VAT1LQ9HCJ6 419 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 SH2D2AQ9NP31 389 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 RDH8Q9NYR8 311 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 CTNNA3Q9UI47 895 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 PTBP2Q9UKA9 531 aaKnown RBP2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 MGAT4BQ9UQ53 548 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 UGT2A1Q9Y4X1 527 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 U3KQV3 271 aa2.7□□□□□ -1.98
HMGB1P49-201ENST00000418882 NCAPD2Q15021 1401 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 A0A087WZY1 265 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 A0A1B0GUA9 196 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 TMEM110-MUSTN1A8MSY1 372 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 SULT2B1O00204 365 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 SCGB2A1O75556 95 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 BBOX1O75936 387 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 IQCF3P0C7M6 154 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 CLUP10909 449 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 HNRNPA2B1P22626 353 aaKnown RBP2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 GLRA2P23416 452 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 CYP2F1P24903 491 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 AXLP30530 894 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 CD80P33681 288 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 TIMM10P62072 90 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 RAB40BQ12829 278 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 MRPL28Q13084 256 aaKnown RBP2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 SCGB2A2Q13296 93 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 LIPNQ5VXI9 398 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 FAHD2BQ6P2I3 314 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 WDR74Q6RFH5 385 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZNF573Q86YE8 665 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 GCNT2Q8N0V5 402 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 MTURNQ8N3F0 131 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 ARIH2OSQ8N7S6 290 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR51G2Q8NGK0 314 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 THRSPQ92748 146 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 PINX1Q96BK5 328 aaKnown RBP2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 FAHD2AQ96GK7 314 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 TCHPQ9BT92 498 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 DUSP16Q9BY84 665 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 TMEM117Q9H0C3 514 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 TM9SF3Q9HD45 589 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 APMAPQ9HDC9 416 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 PLLPQ9Y342 182 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 OARD1Q9Y530 152 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 WSB1Q9Y6I7 421 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 NSD2O96028 1365 aa2.69□□□□□ -1.98
HMGB1P49-201ENST00000418882 VSTM2BA6NLU5 285 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 A8MUA0 341 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 JAK2O60674 1132 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZNF780AO75290 641 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 SLITRK3O94933 977 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 CA1P00915 261 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 INSP01308 110 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 PCCBP05166 539 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 KRT8P05787 483 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 DRD5P21918 477 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 HOXD10P28358 340 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 GDI1P31150 447 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 EWSR1Q01844 656 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 PDZK1IP1Q13113 114 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 SNTB2Q13425 540 aaKnown RBP2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 RIPK1Q13546 671 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 CUL2Q13617 745 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 USH1GQ495M9 461 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 TFDP3Q5H9I0 405 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 PAGE3Q5JUK9 113 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 TPGS2Q68CL5 300 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 RNF165Q6ZSG1 346 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 RFLNAQ6ZTI6 216 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 CDH26Q8IXH8 852 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 ZCCHC7Q8N3Z6 543 aaKnown RBP2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR5L2Q8NGL0 311 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 OR2T3Q8NH03 318 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 CHCHD10Q8WYQ3 142 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 MRPL13Q9BYD1 178 aaKnown RBP2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 RMND5AQ9H871 391 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 POLD4Q9HCU8 107 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 KIF3AQ9Y496 699 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 CACNG2Q9Y698 323 aa2.68□□□□□ -1.98
HMGB1P49-201ENST00000418882 SPACA6W5XKT8 324 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms