RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 DUSP22Q9NRW4 184 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 TAS2R10Q9NYW0 307 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 FLRT3Q9NZU0 649 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 RPS6KA6Q9UK32 745 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 USP22Q9UPT9 525 aa9.32□□□□□ -0.92
NEDD8-202ENST00000396828 FN1P02751 2386 aaKnown RBP9.32□□□□□ -0.92
NEDD8-202ENST00000396828 SH3D21A4FU49 640 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 FRG2CA6NGY1 282 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 OR6C70A6NIJ9 312 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 A8MXE2 369 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 ACOX3O15254 700 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 ENTPD5O75356 428 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 REM1O75628 298 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 ACP2P11117 423 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 UMPSP11172 480 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF708P17019 499 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 PSMA4P25789 261 aaKnown RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 GABRA3P34903 492 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 DCAF7P61962 342 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 PSPHP78330 225 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 FAM27E3Q08E93 113 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SNTA1Q13424 505 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SF3B4Q15427 424 aaKnown RBP eCLIP9.31□□□□□ -0.923e-15■■■■□ 24.1
NEDD8-202ENST00000396828 DUSP5Q16690 384 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 GPAT3Q53EU6 434 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 PRAMEF8Q5VWM4 474 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 PRAMEF7Q5VXH5 474 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 VWA1Q6PCB0 445 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 C22orf34Q6ZV56 151 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 PATL1Q86TB9 770 aaKnown RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 CXorf67Q86X51 503 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 KRT73Q86Y46 540 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SLC16A11Q8NCK7 471 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 OR52E4Q8NGH9 312 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 BBS10Q8TAM1 723 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SLC26A7Q8TE54 656 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SLC38A5Q8WUX1 472 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 RNF138Q8WVD3 245 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 CDS1Q92903 461 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 EFHD2Q96C19 240 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SLC35A4Q96G79 324 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 BTBD9Q96Q07 612 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 TRNT1Q96Q11 434 aaKnown RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF607Q96SK3 696 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SPATA5L1Q9BVQ7 753 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 BTBD2Q9BX70 525 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 CACYBPQ9HB71 228 aaKnown RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 Q9N2J8 555 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 ADPRHL2Q9NX46 363 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 C6orf203Q9P0P8 240 aaPredicted RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 SAMD4AQ9UPU9 718 aaKnown RBP9.31□□□□□ -0.92
NEDD8-202ENST00000396828 OR10H1Q9Y4A9 318 aa9.31□□□□□ -0.92
NEDD8-202ENST00000396828 CUBNO60494 3623 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 TLN2Q9Y4G6 2542 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 ABCA2Q9BZC7 2435 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 A0A0G2JPF8 293 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 A0A1W2PNV4 684 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 HNRNPCL2B2RXH8 293 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 HNRNPCL3B7ZW38 293 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 FKBP6O75344 327 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 SERPINB7O75635 380 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 NKX2-2O95096 273 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 SERPINA1P01009 418 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 GPIP06744 558 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 HNRNPCL4P0DMR1 293 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 FOSL1P15407 271 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 HOXB6P17509 224 aaKnown RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 ATP6V1B2P21281 511 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 AQP1P29972 269 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 SRD5A2P31213 254 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 KDELR2P33947 212 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 SUCLG1P53597 346 aaKnown RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 POU6F2P78424 691 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 PSG6Q00889 435 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 LTBQ06643 244 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 CCNIQ14094 377 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 SYPL1Q16563 259 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 ARHGAP11BQ3KRB8 267 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 LRRC23Q53EV4 343 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 DCST2Q5T1A1 773 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 HEPHL1Q6MZM0 1159 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 ZFP1Q6P2D0 407 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 CCDC80Q76M96 950 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 CIARTQ8N365 385 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 OR5M1Q8NGP8 315 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 RASSF5Q8WWW0 418 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 LZICQ8WZA0 190 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 HOXB13Q92826 284 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 WNT2BQ93097 391 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 STARD4Q96DR4 205 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 OTUB1Q96FW1 271 aaPredicted RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 TMEM19Q96HH6 336 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 RNF145Q96MT1 663 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 SFXN2Q96NB2 322 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 DACH2Q96NX9 599 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 WFIKKN1Q96NZ8 548 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 TM9SF2Q99805 663 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 SFXN3Q9BWM7 321 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 BCL2L10Q9HD36 194 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms