RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TSEN54Q7Z6J9 526 aaKnown RBP11.43□□□□□ -0.58
SMN1-202ENST00000380707 ADGRG3Q86Y34 549 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 ST6GALNAC3Q8NDV1 305 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 C3orf49Q96BT1 292 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 C7orf34Q96L11 122 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 LRGUKQ96M69 825 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 TMEM185BQ9H7F4 350 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 OSGIN1Q9UJX0 560 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 PRDM4Q9UKN5 801 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 MYO18BQ8IUG5 2567 aa11.43□□□□□ -0.58
SMN1-202ENST00000380707 A0A0B4J2E0 115 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 A0A1B0GX12 115 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 OR14I1A6ND48 311 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 H0YC42 278 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 STAMBPO95630 424 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 ACTL6AO96019 429 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 THY1P04216 161 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 IFNW1P05000 195 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 PEPDP12955 493 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 PTGS2P35354 604 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 GCKP35557 465 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 HTR3AP46098 478 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 YAP1P46937 504 aaKnown RBP11.42□□□□□ -0.58
SMN1-202ENST00000380707 ERFP50548 548 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 POLR2HP52434 150 aaKnown RBP11.42□□□□□ -0.58
SMN1-202ENST00000380707 CDH12P55289 794 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 TPD52P55327 224 aaPredicted RBP11.42□□□□□ -0.58
SMN1-202ENST00000380707 CLDN20P56880 219 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 PIN1Q13526 163 aaPredicted RBP11.42□□□□□ -0.58
SMN1-202ENST00000380707 C3AR1Q16581 482 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 LILRA2Q8N149 483 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 ADAMTS16Q8TE57 1224 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 RELTQ969Z4 430 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 SARAFQ96BY9 339 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 MS4A3Q96HJ5 214 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 SEPHS2Q99611 448 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 TMEM27Q9HBJ8 222 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 RPS6KB2Q9UBS0 482 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 ACAD8Q9UKU7 415 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 COL12A1Q99715 3063 aa11.42□□□□□ -0.58
SMN1-202ENST00000380707 TMED7-TICAM2A0A0A6YYA0 188 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 AQP12BA6NM10 295 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 J3KTA2 159 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 hCG_2039718K7EN88 272 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ZNF708P17019 499 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 CCNA2P20248 432 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 POU3F2P20265 443 aaPredicted RBP11.41□□□□□ -0.58
SMN1-202ENST00000380707 FUT4P22083 530 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ELK4P28324 431 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 SHC1P29353 583 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 SUCLG1P53597 346 aaKnown RBP11.41□□□□□ -0.58
SMN1-202ENST00000380707 CLDN15P56746 228 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 CLDN18P56856 261 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 RAC1P63000 192 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 VLDLRP98155 873 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 SRYQ05066 204 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 C19orf57Q0VDD7 668 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 MRPL49Q13405 166 aaKnown RBP11.41□□□□□ -0.58
SMN1-202ENST00000380707 IQCCQ4KMZ1 466 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ALG10BQ5I7T1 473 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 EMC4Q5J8M3 183 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 C1orf146Q5VVC0 180 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ZNF613Q6PF04 617 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ULK3Q6PHR2 472 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ATG4DQ86TL0 474 aaPredicted RBP11.41□□□□□ -0.58
SMN1-202ENST00000380707 ZGRF1Q86YA3 2104 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 AQP12AQ8IXF9 295 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ATP6V1C2Q8NEY4 427 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 OR5M9Q8NGP3 310 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 DNAJA4Q8WW22 397 aaPredicted RBP11.41□□□□□ -0.58
SMN1-202ENST00000380707 SMPDL3BQ92485 455 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 WDYHV1Q96HA8 205 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 TRIM15Q9C019 465 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 PNPLA3Q9NST1 481 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 NDUFAF4Q9P032 175 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 CHRNA9Q9UGM1 479 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 A4GNTQ9UNA3 340 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 ZNF835Q9Y2P0 537 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 TMED7Q9Y3B3 224 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 AP4B1Q9Y6B7 739 aa11.41□□□□□ -0.58
SMN1-202ENST00000380707 POLEQ07864 2286 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 TMEM72A0PK05 275 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 ERICH4A6NGS2 130 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 FFAR1O14842 300 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 SLC19A2O60779 497 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 LYPD3O95274 346 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 CPN1P15169 458 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 ABOP16442 354 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 CXCR1P25024 350 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 SFTPDP35247 375 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 SELENBP1Q13228 472 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 BCL2A1Q16548 175 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 TMEM176BQ3YBM2 270 aaPredicted RBP11.4□□□□□ -0.58
SMN1-202ENST00000380707 GXYLT1Q4G148 440 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 C3orf33Q6P1S2 294 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 GGNQ86UU5 652 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 SPATA24Q86W54 205 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 UBQLNLQ8IYU4 475 aa11.4□□□□□ -0.58
SMN1-202ENST00000380707 FAM57AQ8TBR7 257 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms