RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ZNF613Q6PF04 617 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CD200R1LQ6Q8B3 271 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF322Q6U7Q0 402 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 TMPRSS11AQ6ZMR5 421 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 MEPCEQ7L2J0 689 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 GATAD2AQ86YP4 633 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ARIH2OSQ8N7S6 290 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CYB561A3Q8NBI2 242 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 OR52L1Q8NGH7 329 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 OR4C3Q8NH37 302 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 C16orf52Q8NHV5 167 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CCDC74AQ96AQ1 378 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 TNFRSF13CQ96RJ3 184 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC38A3Q99624 504 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF559Q9BR84 538 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 LRRN3Q9H3W5 708 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 TMEM27Q9HBJ8 222 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ISYNA1Q9NPH2 558 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 TBC1D24Q9ULP9 559 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 MAU2Q9Y6X3 613 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 EML5Q05BV3 1969 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 VPS13AQ96RL7 3174 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 A0A1W2PQL4 384 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CHURC1-FNTBB4DL54 471 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 AQP9O43315 295 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CHP2O43745 196 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 PPP1R3DO95685 299 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 GYPBP06028 91 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 MRPL3P09001 348 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 IFI6P09912 130 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 BMP8BP34820 402 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 HOXD12P35452 270 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 FNTBP49356 437 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 IGLV3-21P80748 117 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 RUNX1T1Q06455 604 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CBX3Q13185 183 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ELOCQ15369 112 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNHIT3Q15649 155 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ALG10BQ5I7T1 473 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 KIRREL2Q6UWL6 708 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 BMP8AQ7Z5Y6 402 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 OR8H2Q8N162 312 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CADM2Q8N3J6 435 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 KLHL36Q8N4N3 616 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CAMKK1Q8N5S9 505 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 HPS1Q92902 700 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF426Q9BUY5 554 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 FOXQ1Q9C009 403 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 OR51V1Q9H2C8 321 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 MARCH7Q9H992 704 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CPNE5Q9HCH3 593 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC2A4RGQ9NR83 387 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 POLE3Q9NRF9 147 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CMC2Q9NRP2 79 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CMAHPQ9Y471 501 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CABIN1Q9Y6J0 2220 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 C2orf92A0A1B0GVN3 265 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CCDC182A6NF36 153 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CD8B2A6NJW9 211 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 METTL12A8MUP2 240 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 NPIPB9F8W1W9 429 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF254O75437 659 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 SNX4O95219 450 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 NSA2O95478 260 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CD8BP10966 210 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CD27P26842 260 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC9A3P48764 834 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CTBP2P56545 445 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 TDGQ13569 410 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CRMP1Q14194 572 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF595Q8IYB9 648 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CDK20Q8IZL9 346 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 LRRC17Q8N6Y2 441 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF321PQ8N8H1 164 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 OR51Q1Q8NH59 317 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 DGAT2Q96PD7 388 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 PHF7Q9BWX1 381 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 OR10A5Q9H207 317 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 SIAEQ9HAT2 523 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 TIGARQ9NQ88 270 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 UCKL1Q9NWZ5 548 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 SOHLH2Q9NX45 425 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 CFAP54Q96N23 3096 aa7.33□□□□□ -1.24
PDLIM5-204ENST00000380176 MUC3AQ02505 3323 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 TRDV1A0A1B0GX56 115 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 GABRPO00591 440 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF217O75362 1048 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 RCBTB2O95199 551 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 PTTG1O95997 202 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 CLPSP04118 112 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 FGF9P31371 208 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC16A1P53985 500 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 CRYZQ08257 329 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 FGFBP1Q14512 234 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 UBXN2BQ14CS0 331 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 TMEM44Q2T9K0 475 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 PRAMEF17Q5VTA0 474 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 TMEM91Q6ZNR0 172 aa7.32□□□□□ -1.24
PDLIM5-204ENST00000380176 OAFQ86UD1 273 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms