RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TMEM43Q9BTV4 400 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 DPH1Q9BZG8 443 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 SLC19A3Q9BZV2 496 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 ING2Q9H160 280 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 HHATLQ9HCP6 504 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 TAS2R10Q9NYW0 307 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 AHCTF1Q8WYP5 2266 aa21.74■■□□□ 1.07
SNX3-203ENST00000368979 PTPRZ1P23471 2315 aaPredicted RBP21.73■■□□□ 1.07
SNX3-203ENST00000368979 EIF4E1BA6NMX2 242 aaKnown RBP21.73■■□□□ 1.07
SNX3-203ENST00000368979 CCL3P10147 92 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 GP1BBP13224 206 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 SRSF6Q13247 344 aaKnown RBP21.73■■□□□ 1.07
SNX3-203ENST00000368979 TBC1D25Q3MII6 688 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 SLX4IPQ5VYV7 408 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 TMEM236Q5W0B7 351 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 ZNF620Q6ZNG0 422 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 GPALPP1Q8IXQ4 340 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 CDK20Q8IZL9 346 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 ZNF786Q8N393 782 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 CLDN22Q8N7P3 220 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 SGCZQ96LD1 299 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 ANGPTL4Q9BY76 406 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 PLA2G12AQ9BZM1 189 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 EGLN3Q9H6Z9 239 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 MED11Q9P086 117 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 MYRFQ9Y2G1 1151 aa21.73■■□□□ 1.07
SNX3-203ENST00000368979 ENO4A6NNW6 628 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 IGF2P01344 180 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 ELK4P28324 431 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 DLX5P56178 289 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 CRYZQ08257 329 aaKnown RBP21.72■■□□□ 1.07
SNX3-203ENST00000368979 MAD2L1BPQ15013 274 aaPredicted RBP21.72■■□□□ 1.07
SNX3-203ENST00000368979 ATP1A1-AS1Q5TC04 95 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 PRAMEF20Q5VT98 475 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 C12orf73Q69YU5 71 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 LAIR2Q6ISS4 152 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 RTL4Q6ZR62 310 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 P3H2Q8IVL5 708 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 ENTHD1Q8IYW4 607 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 BEST3Q8N1M1 668 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 FAM81AQ8TBF8 368 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 LHPPQ9H008 270 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 IL20Q9NYY1 176 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 OSGIN1Q9UJX0 560 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 CEP250Q9BV73 2442 aa21.72■■□□□ 1.07
SNX3-203ENST00000368979 UNC119BA6NIH7 251 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 CLN3Q13286 438 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 SLC22A10Q63ZE4 541 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 GRINAQ7Z429 371 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 DEPDC4Q8N2C3 294 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 CLEC1AQ8NC01 280 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 OR8D4Q8NGM9 314 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 TMEM234Q8WY98 164 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 ST8SIA1Q92185 356 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 SLC25A19Q9HC21 320 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 PROK2Q9HC23 129 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 KLK13Q9UKR3 277 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 RNF6Q9Y252 685 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 CDH10Q9Y6N8 788 aa21.71■■□□□ 1.07
SNX3-203ENST00000368979 CNOT1A5YKK6 2376 aaKnown RBP21.71■■□□□ 1.07
SNX3-203ENST00000368979 ANKRD33BA6NCL7 494 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 ITGA3P26006 1051 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 POLR2HP52434 150 aaKnown RBP21.7■■□□□ 1.07
SNX3-203ENST00000368979 CDK5Q00535 292 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 CDK5R2Q13319 367 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 KCTD21Q4G0X4 260 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 BROXQ5VW32 411 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 CYP4Z2PQ8N1L4 340 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 FADS6Q8N9I5 356 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 OR2M3Q8NG83 312 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 CNIH3Q8TBE1 160 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 TEX47Q8TBZ9 253 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 THAP4Q8WY91 577 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 HDAC2Q92769 488 aaKnown RBP21.7■■□□□ 1.07
SNX3-203ENST00000368979 YTHDF1Q9BYJ9 559 aaKnown RBP21.7■■□□□ 1.07
SNX3-203ENST00000368979 TEKT2Q9UIF3 430 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 PCDHGB6Q9Y5F9 930 aa21.7■■□□□ 1.07
SNX3-203ENST00000368979 HTR3EA5X5Y0 456 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 EFCAB9A8MZ26 197 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 ETV2O00321 342 aaPredicted RBP21.7■■□□□ 1.06
SNX3-203ENST00000368979 PRKCAP17252 672 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 FUT1P19526 365 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 HLCSP50747 726 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 CDC42P60953 191 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 EGR4Q05215 589 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 INPP5JQ15735 1006 aaPredicted RBP21.7■■□□□ 1.06
SNX3-203ENST00000368979 C6orf141Q5SZD1 244 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 WDSUB1Q8N9V3 476 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 UBE2FQ969M7 185 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 SGTBQ96EQ0 304 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 WDR70Q9NW82 654 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 ZNF226Q9NYT6 803 aa21.7■■□□□ 1.06
SNX3-203ENST00000368979 CPAMD8Q8IZJ3 1885 aa21.69■■□□□ 1.06
SNX3-203ENST00000368979 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.69■■□□□ 1.06
SNX3-203ENST00000368979 TRIM64A6NGJ6 449 aa21.69■■□□□ 1.06
SNX3-203ENST00000368979 WISP1O95388 367 aa21.69■■□□□ 1.06
SNX3-203ENST00000368979 SAGP10523 405 aaPredicted RBP21.69■■□□□ 1.06
SNX3-203ENST00000368979 GABRB1P18505 474 aa21.69■■□□□ 1.06
SNX3-203ENST00000368979 WT1P19544 449 aaPredicted RBP21.69■■□□□ 1.06
SNX3-203ENST00000368979 HTR3AP46098 478 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms