RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GGT1P19440 569 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ELAVL4P26378 380 aaKnown RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 TBPL1P62380 186 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ACTA2P62736 377 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ACTG2P63267 376 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 OR2B11Q5JQS5 317 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 OR1N1Q8NGS0 311 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 LINC01599Q8WXQ3 324 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 MYLIPQ8WY64 445 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SCRN2Q96FV2 425 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 LRRC3Q9BY71 257 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 HRH4Q9H3N8 390 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 OAZ3Q9UMX2 235 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 POMPQ9Y244 141 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 POMT1Q9Y6A1 747 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ATRNO75882 1429 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 A0A0U1RQS6 177 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SLC9B1P1A6NJY1 282 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SURF4O15260 269 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ADAM12O43184 909 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SPOCK1Q08629 439 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ZNF763Q0D2J5 394 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 LMAN2Q12907 356 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SLC9A3R2Q15599 337 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 MSMO1Q15800 293 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 PHYHD1Q5SRE7 291 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 NCBP2-AS2Q69YL0 99 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 TSPAN33Q86UF1 283 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 PPP1R3BQ86XI6 285 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 FNDC9Q8TBE3 224 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 TFAP2CQ92754 450 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ITPKCQ96DU7 683 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 DPH1Q9BZG8 443 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ULBP2Q9BZM5 246 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 EHFQ9NZC4 300 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 GIMAP2Q9UG22 337 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 NDRG3Q9UGV2 375 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 ZNF230Q9UIE0 474 aaPredicted RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 EDF1O60869 148 aaKnown RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 LYPLA2O95372 231 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SPP1P10451 314 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 CPT2P23786 658 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 S100A4P26447 101 aaKnown RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 CERS1P27544 350 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 RAB5CP51148 216 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 HSF1Q00613 529 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 FKBP10Q96AY3 582 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 KCNJ15Q99712 375 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 EGLN1Q9GZT9 426 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 SEC14L4Q9UDX3 406 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 PURGQ9UJV8 347 aaKnown RBP9.17□□□□□ -0.94
CHD3-202ENST00000358181 SLC6A14Q9UN76 642 aa9.17□□□□□ -0.94
CHD3-202ENST00000358181 DLG5Q8TDM6 1919 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ABCD4O14678 606 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 KCNAB3O43448 404 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 UBCP0CG48 685 aaKnown RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 VASNQ6EMK4 673 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TANGO2Q6ICL3 276 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 MRPL10Q7Z7H8 261 aaKnown RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 NATD1Q8N6N6 113 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 NANPQ8TBE9 248 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 MIB2Q96AX9 1013 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 CD244Q9BZW8 370 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ROBO3Q96MS0 1386 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 CREG1O75629 220 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 SCRG1O75711 98 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 OR5G3P0C626 314 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ACPPP15309 386 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 IL4RP24394 825 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ELK4P28324 431 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 GJA4P35212 333 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 HOXD12P35452 270 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 WDR4P57081 412 aaKnown RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 MAT1AQ00266 395 aaKnown RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 TBC1D28Q2M2D7 210 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TMEM31Q5JXX7 168 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 GCNT2Q8N0V5 402 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 SPIN2AQ99865 258 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 SPIN2BQ9BPZ2 258 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 EDEM2Q9BV94 578 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 CDCP1Q9H5V8 836 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 B3GAT1Q9P2W7 334 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 IGKV3-7A0A075B6H7 116 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 RNF212BA8MTL3 300 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 H3BSA7 217 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 AK1P00568 194 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 HTR2BP41595 481 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 DOC2BQ14184 412 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 COX15Q7KZN9 410 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 TCTE3Q8IZS6 198 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ZMYND19Q96E35 227 aaPredicted RBP9.16□□□□□ -0.94
CHD3-202ENST00000358181 PTTG3PQ9NZH4 202 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 SLCO3A1Q9UIG8 710 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 FBXO4Q9UKT5 387 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 PRAMEF4O60810 478 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 ATP1B3P54709 279 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 KLHDC10Q6PID8 442 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 PRR7Q8TB68 274 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 OR4K3Q96R72 315 aa9.16□□□□□ -0.94
CHD3-202ENST00000358181 DUSP23Q9BVJ7 150 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms