RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 EXOGQ9Y2C4 368 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 PUS1Q9Y606 427 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 NUP188Q5SRE5 1749 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 DOT1LQ8TEK3 1739 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 MAN2B1O00754 1011 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 SYNGR4O95473 234 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 FABP4P15090 132 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 EPHA4P54764 986 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 SIM1P81133 766 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 HTR4Q13639 388 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM65Q6PI78 240 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 NXPE4Q6UWF7 544 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 B3GNT8Q7Z7M8 397 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 NLGN4YQ8NFZ3 816 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM68Q96MH6 324 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 GHITMQ9H3K2 345 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 C5AR2Q9P296 337 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 MT-ND4P03905 459 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 SFTPCP11686 197 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 BDKRB2P30411 391 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 NAA10P41227 235 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 NHLH2Q02577 135 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC17A1Q14916 467 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 TOMM34Q15785 309 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 TBCEQ15813 527 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 KANSL1Q7Z3B3 1105 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 OR5P2Q8WZ92 322 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 HHIPQ96QV1 700 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 RBP7Q96R05 134 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 MVB12BQ9H7P6 319 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 BRF2Q9HAW0 419 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 PARD6AQ9NPB6 346 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC6A5Q9Y345 797 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 A0A1B0GV72 72 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 ADAM11O75078 769 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 SNNO75324 88 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 SHC2P98077 582 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF252P-AS1Q0IIN9 211 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 GINS1Q14691 196 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 RAET1LQ5VY80 246 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 OR4C11Q6IEV9 310 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 ZFAND4Q86XD8 727 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 OR6F1Q8NGZ6 308 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 OR56B4Q8NH76 319 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 OSTF1Q92882 214 aa10.42□□□□□ -0.74
SMARCE1-202ENST00000348513 AP4M1O00189 453 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 PPM1DO15297 605 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC16A5O15375 505 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CPNE6O95741 557 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 OR8U9P0C7N5 309 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 MAP2K6P52564 334 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 LRRC25Q8N386 305 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 SCMH1Q96GD3 660 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 SIRT7Q9NRC8 400 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 PRODH2Q9UF12 536 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 COL2A1P02458 1487 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 RNF224P0DH78 156 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CCR7P32248 378 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 LEXMQ3ZCV2 418 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 GTDC1Q4AE62 458 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 OR5M8Q8NGP6 311 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 NT5C3BQ969T7 300 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF275Q9NSD4 429 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 ACSS1Q9NUB1 689 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 LRRC37A3O60309 1634 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 TRBV23-1A0A0A0MS06 115 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CACNG3O60359 315 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF44P15621 663 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CRABP1P29762 137 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 RFC3P40938 356 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CXCR4P61073 352 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 SRYQ05066 204 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 ADPRMQ3LIE5 342 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 DNAJC22Q8N4W6 341 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 MS4A15Q8N5U1 240 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 FRMD1Q8N878 549 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 C15orf54Q8N8G6 183 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM102Q8N9M5 508 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 FIBINQ8TAL6 211 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 NOX3Q9HBY0 568 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 DMRT1Q9Y5R6 373 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 TCRBV3S1A0A5B6 114 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC33A1O00400 549 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 SFTPBP07988 381 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 FDXRP22570 491 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CLDN2P57739 230 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 UBE2IP63279 158 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 RNASE10Q5GAN6 216 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 PLPP6Q8IY26 295 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 LINC00471Q8N535 108 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 BBS10Q8TAM1 723 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 TMEM18Q96B42 140 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 UHRF1Q96T88 793 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 G6PC3Q9BUM1 346 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 TAS2R8Q9NYW2 309 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CD8B2A6NJW9 211 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 EMC8O43402 210 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 CD8BP10966 210 aa10.41□□□□□ -0.74
SMARCE1-202ENST00000348513 TAGLN2P37802 199 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms