RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TFPIP10646 304 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 IGHV1-2P23083 117 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 PGM1P36871 562 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 ATAD3BQ5T9A4 648 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 CSPG4Q6UVK1 2322 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 ANKRD46Q86W74 232 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 ZNF781Q8N8C0 355 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 SLC25A43Q8WUT9 341 aaPredicted RBP17.34■□□□□ 0.37
CXCL3-201ENST00000296026 XAGE5Q8WWM1 108 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 RAB8BQ92930 207 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 REG4Q9BYZ8 158 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 DPY30Q9C005 99 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 SLCO5A1Q9H2Y9 848 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 ADAM21Q9UKJ8 722 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 WDR45Q9Y484 360 aa17.34■□□□□ 0.37
CXCL3-201ENST00000296026 KIAA0513O60268 411 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 SCN2BO60939 215 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 CPSF4O95639 269 aaKnown RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 AGR2O95994 175 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 GGT1P19440 569 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 COX5AP20674 150 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 UQCRC2P22695 453 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 ACVR1BP36896 505 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 APOBEC1P41238 236 aaKnown RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 TIMM23BQ5SRD1 257 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 TYW3Q6IPR3 259 aaKnown RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 TNFAIP8L2Q6P589 184 aaPredicted RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 MTDHQ86UE4 582 aaKnown RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 FAM71CQ8NEG0 241 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 ZNF563Q8TA94 476 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 AENQ8WTP8 325 aaKnown RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 CCDC106Q9BWC9 280 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 CTPS2Q9NRF8 586 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 CISD1Q9NZ45 108 aaKnown RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 EMC3Q9P0I2 261 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 SLC35A3Q9Y2D2 325 aa17.33■□□□□ 0.36
CXCL3-201ENST00000296026 SPIN1Q9Y657 262 aaPredicted RBP17.33■□□□□ 0.36
CXCL3-201ENST00000296026 JMJD1CQ15652 2540 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 PRSS51A0A1B0GVH4 220 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 SHISA9B4DS77 424 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 BCAS1O75363 584 aaPredicted RBP17.32■□□□□ 0.36
CXCL3-201ENST00000296026 PGM3O95394 542 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 IGHV4-39P01824 125 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 SERPINE1P05121 402 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 MYZAPP0CAP1 466 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 RYKP34925 604 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 ABCE1P61221 599 aaKnown RBP17.32■□□□□ 0.36
CXCL3-201ENST00000296026 PHC1P78364 1004 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 FUT5Q11128 374 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 PDK3Q15120 406 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 CHI3L2Q15782 390 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 ANXA8L1Q5VT79 327 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 FBXW9Q5XUX1 488 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 ABLIM2Q6H8Q1 611 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 P2RY8Q86VZ1 359 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 UBE2J2Q8N2K1 259 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 ZNF433Q8N7K0 673 aaPredicted RBP17.32■□□□□ 0.36
CXCL3-201ENST00000296026 VPS37AQ8NEZ2 397 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 OIT3Q8WWZ8 545 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 ROPN1LQ96C74 230 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 DNAJA3Q96EY1 480 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 TRAF4Q9BUZ4 470 aaPredicted RBP17.32■□□□□ 0.36
CXCL3-201ENST00000296026 SAP130Q9H0E3 1048 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 ALG2Q9H553 416 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 POLE3Q9NRF9 147 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 NPAP1Q9NZP6 1156 aa17.32■□□□□ 0.36
CXCL3-201ENST00000296026 IGKV3D-15A0A087WSY6 115 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 OR5H1A6NKK0 313 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 ZNF716A6NP11 495 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 ABCD4O14678 606 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 ANKRD28O15084 1053 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 NDUFS7O75251 213 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 CRLF1O75462 422 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 CD8AP01732 235 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 IGHV3-9P01782 118 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 THBS1P07996 1170 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 GUSBP08236 651 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 CDH11P55287 796 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 DMTNQ08495 405 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 SAXO2Q658L1 398 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 EMBQ6PCB8 327 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 FRRS1Q6ZNA5 592 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 SSX8Q7RTT4 187 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 HMGN2P46Q86SG4 172 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 TESCQ96BS2 214 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 ZG16BQ96DA0 208 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 ZHX1-C8orf76Q96EF9 292 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 ARL5BQ96KC2 179 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 TMEM109Q9BVC6 243 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 C20orf27Q9GZN8 174 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 FAIMQ9NVQ4 179 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 CHRNA9Q9UGM1 479 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 GDF2Q9UK05 429 aaPredicted RBP17.31■□□□□ 0.36
CXCL3-201ENST00000296026 NOSIPQ9Y314 301 aaKnown RBP17.31■□□□□ 0.36
CXCL3-201ENST00000296026 RAP2CQ9Y3L5 183 aa17.31■□□□□ 0.36
CXCL3-201ENST00000296026 RAD51DO75771 328 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 PMS2P2O95744 297 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 KHKP50053 298 aa17.3■□□□□ 0.36
CXCL3-201ENST00000296026 RPL14P50914 215 aaKnown RBP17.3■□□□□ 0.36
CXCL3-201ENST00000296026 KCNJ10P78508 379 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms