RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ICOSLGO75144 302 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 HEXBP07686 556 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 PEPDP12955 493 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 CPEP16870 476 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 HK1P19367 917 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 PSMA1P25786 263 aaKnown RBP8.78□□□□□ -1
TRIM55-201ENST00000276573 IL12BP29460 328 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 SLC6A6P31641 620 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 CRYBB2P43320 205 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 SLC9A3P48764 834 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 PNLIPRP2P54317 469 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 FOXL2P58012 376 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 RPS3AP61247 264 aaKnown RBP8.78□□□□□ -1
TRIM55-201ENST00000276573 DCDP81605 110 aaKnown RBP8.78□□□□□ -1
TRIM55-201ENST00000276573 ITGADQ13349 1161 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 ZNF846Q147U1 533 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 ANKDD1AQ495B1 522 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 TRIM61Q5EBN2 209 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 OR2G6Q5TZ20 316 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 ANKRD37Q7Z713 158 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 LHFPL3Q86UP9 236 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 PHC2Q8IXK0 858 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 AMER2Q8N7J2 671 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 ZNF441Q8N8Z8 693 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 ZNF485Q8NCK3 441 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 MCFD2Q8NI22 146 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 S100ZQ8WXG8 99 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 GATAD2BQ8WXI9 593 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 ZNF649Q9BS31 505 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 SLC19A3Q9BZV2 496 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 NXF2Q9GZY0 626 aaKnown RBP8.78□□□□□ -1
TRIM55-201ENST00000276573 AKIP1Q9NQ31 210 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 FBXO4Q9UKT5 387 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 CORINQ9Y5Q5 1042 aa8.78□□□□□ -1
TRIM55-201ENST00000276573 IGHV3-20A0A0C4DH32 117 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 A0A1W2PQD3 144 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 HTR3EA5X5Y0 456 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 METTL15A6NJ78 407 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 VSTM2BA6NLU5 285 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 IDSB3KWA1 339 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 PRR23D1E9PI22 279 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 J3QRE1 110 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 J3QRK9 145 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 NDUFB2O95178 105 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 PPP1R3DO95685 299 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 CER1O95813 267 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 IGHA1P01876 353 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 PRR23D2P0DMB1 279 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 PNMTP11086 282 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 ATP6V1E1P36543 226 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 SLC1A3P43003 542 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 DUSP3P51452 185 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 DAB2P98082 770 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 TMED1Q13445 227 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 TPBGQ13641 420 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 CLPPQ16740 277 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 ZNF404Q494X3 552 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 LIPKQ5VXJ0 399 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 NIPAL3Q6P499 406 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 SLC23A3Q6PIS1 610 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 ATG4DQ86TL0 474 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 LRRC17Q8N6Y2 441 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 TMEM105Q8N8V8 129 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 DTWD2Q8NBA8 298 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 SLC37A3Q8NCC5 494 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 PSD4Q8NDX1 1056 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 NFAM1Q8NET5 270 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 OR5M3Q8NGP4 307 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 OR9Q1Q8NGQ5 310 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 TM9SF4Q92544 642 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 NACC2Q96BF6 587 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 OMA1Q96E52 524 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 NECAB3Q96P71 396 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 GFM1Q96RP9 751 aaKnown RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 TEAD3Q99594 435 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 ARHGAP9Q9BRR9 750 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 JAM3Q9BX67 310 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 HCAR1Q9BXC0 346 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 RTN4RQ9BZR6 473 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 SEMA4CQ9C0C4 833 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 MMP27Q9H306 513 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 HMG20AQ9NP66 347 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 NDUFB11Q9NX14 153 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 TNFRSF10DQ9UBN6 386 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 STUB1Q9UNE7 303 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 SPIN1Q9Y657 262 aaPredicted RBP8.77□□□□□ -1
TRIM55-201ENST00000276573 A3GALT2U3KPV4 340 aa8.77□□□□□ -1
TRIM55-201ENST00000276573 SEC16AO15027 2179 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ADAMTS9Q9P2N4 1935 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 IGKV1D-42A0A075B6H8 117 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ELOA3DA6NLF2 546 aaPredicted RBP8.77□□□□□ -1.01
TRIM55-201ENST00000276573 RIIAD1A6NNX1 92 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ALG1L2C9J202 215 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 LRRN3E7EW58 273 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 EIF4E2O60573 245 aaKnown RBP8.77□□□□□ -1.01
TRIM55-201ENST00000276573 ALOX12BO75342 701 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 OR7A10O76100 309 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 IGF2P01344 180 aa8.77□□□□□ -1.01
TRIM55-201ENST00000276573 TSPAN19P0C672 248 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms