RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Cmtm6Q9CZ69 183 aa20.91■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Ankrd22Q9D3J5 191 aa20.91■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Dusp3Q9D7X3 185 aa20.91■□□□□ 0.94
Scn1b-201ENSMUST00000098548 AgkQ9ESW4 421 aa20.91■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Dctn6Q9WUB4 190 aa20.91■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Ighv1-43A0A0A6YXN5 117 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Olfr653E9PVA0 317 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Gm8159E9Q0R1 267 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 4930451I11RikE9Q9R3 111 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Gm44G3UW88 330 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Cd14P10810 366 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Tacr1P30548 407 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 BmxP97504 651 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Agbl5Q09M02 886 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 RogdiQ3TDK6 287 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Taar6Q5QD13 345 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Cd53Q61451 219 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Ffar4Q7TMA4 361 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Sult2a8Q8BGL3 282 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Ppwd1Q8CEC6 646 aaKnown RBP20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 RorbQ8R1B8 470 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Coq6Q8R1S0 476 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Ccdc59Q8R2N0 240 aaKnown RBP20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 NagsQ8R4H7 527 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Akr1d1Q8VCX1 325 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Pcdh18Q8VHR0 1134 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Mrgprb3Q91ZC1 312 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Reg4Q9D8G5 157 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Dll4Q9JI71 686 aa20.9■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Gm5678A0A1B0GRG8 277 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 A0A1Y7VIU7 259 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 2410141K09RikK7N769 464 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Klk1b16P04071 261 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Eef1a1P10126 462 aaKnown RBP20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Hoxd9P28357 339 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Kcnj12P52187 427 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Igfbp5Q07079 271 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Dcp1bQ3U564 578 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Kmt5cQ6Q783 468 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Igsf5Q7TSN7 370 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Efcab3Q80X60 432 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Zik1Q80YP6 463 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Slc49a3Q8CE47 516 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Ndc1Q8VCB1 673 aaKnown RBP20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 OgfrQ99PG2 633 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Ergic3Q9CQE7 383 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Tvp23bQ9D8T4 205 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Entpd4Q9DBT4 613 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Slc39a1Q9QZ03 324 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 CtsjQ9R014 334 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Nfkb2Q9WTK5 899 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Plek2Q9WV52 353 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Mocs2Q9Z223 189 aa20.89■□□□□ 0.94
Scn1b-201ENSMUST00000098548 Kdf1A2A9F4 397 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Gstm5P48774 224 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Cdh10P70408 788 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Fzd7Q61090 572 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Snta1Q61234 503 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Morn4Q6PGF2 146 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Zc3hc1Q80YV2 501 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Gpr171Q8BG55 319 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Nceh1Q8BLF1 408 aaKnown RBP20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 C1sbQ8CFG8 688 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Vmn1r189Q8K3N3 312 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Q8R3Y5 413 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr617Q8VGA1 318 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr1389Q8VGX0 311 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Klf7Q99JB0 301 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Bcl2l14Q9CPT0 328 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Sec23bQ9D662 767 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Ift22Q9DAI2 185 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Fezf2Q9ESP5 455 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Raet1dQ9JI58 249 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Rgs1Q9JL25 209 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Dnajb8Q9QYI7 227 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Ccl27Q9Z1X0 120 aa20.89■□□□□ 0.93
Scn1b-201ENSMUST00000098548 SetxA2AKX3 2646 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr1034A0A1L1ST14 310 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Ttll3A4Q9E5 927 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Esp31A8R0W3 114 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Zfp229E9PWT2 705 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Slc16a5G5E8K6 468 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Prss12O08762 761 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Papss2O88428 621 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 RetP35546 1115 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 SnrpgP62309 76 aaKnown RBP20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 2410002F23RikQ3TE80 284 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Nhlrc4Q3UP44 136 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Klhl6Q6V595 619 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Klhl13Q80TF4 654 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 2610318N02RikQ80VT5 305 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Q8BHG2 160 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Kcnk10Q8BUW1 535 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Rae1Q8C570 368 aaKnown RBP20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Aoc1Q8JZQ5 751 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr474Q8VFC9 310 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Olfr1008Q8VGC7 313 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Isoc1Q91V64 297 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Naalad2Q9CZR2 740 aa20.88■□□□□ 0.93
Scn1b-201ENSMUST00000098548 Wdr89Q9D0R9 386 aa20.88■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms