RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Uckl1Q91YL3 548 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gje1Q9CX92 205 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mrpl21Q9D1N9 209 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 FtmtQ9D5H4 237 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sh3bgrlQ9JJU8 114 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Eci2Q9WUR2 391 aa9.67□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmed7D3YZZ5 224 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r107E9PZJ7 861 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r95L7N274 845 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fcn1O70165 334 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Igh-1aP01865 398 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Agtr1bP29755 359 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rad52P43352 420 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dcaf7P61963 342 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Yes1Q04736 541 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tigd2Q0VBL1 525 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Defb41Q30KP6 65 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Apcdd1Q3U128 514 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Epha6Q62413 1035 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vamp1Q62442 118 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cr1lQ64735 483 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sohlh1Q6IUP1 357 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Naa50Q6PGB6 169 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Eid2Q6X7S9 236 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 InavaQ7TN12 663 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NrrosQ8BMT4 693 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rnf26Q8BUH7 424 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 P2ry10bQ8BY68 352 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Steap3Q8CI59 488 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NaxeQ8K4Z3 282 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 B4galt7Q8R087 327 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Adam26aQ9R158 697 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Smchd1Q6P5D8 2007 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Igkv12-98A0A0G2JGF9 115 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr1006A2ALD2 312 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r49D3Z6L3 852 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Olfr550E9Q544 316 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r32K7N686 852 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm4141K9J7H2 306 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NlkO54949 527 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cyp1a2P00186 513 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 P04213 122 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Hoxa9P09631 271 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mcpt2P15119 244 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cst3P21460 140 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Foxk2Q3UCQ1 651 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Bhlha9Q5RJB0 231 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 CalcrQ60755 533 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dvl3Q61062 716 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sox19Q62249 55 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Trim23Q8BGX0 574 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Eif1axQ8BMJ3 144 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Q8R2K8 148 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ubqln4Q99NB8 596 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ate1Q9Z2A5 516 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dock2Q8C3J5 1828 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm20547B8JJN0 1276 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 CfbP04186 761 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 MbpP04370 250 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ankrd28Q505D1 1053 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Prtn3Q61096 254 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 NovQ64299 354 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tas2r107Q7M725 308 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Sult2a8Q8BGL3 282 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Q8BHR8 331 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 AntxrlQ8BVM2 641 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fbxl3Q8C4V4 428 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 FbrsQ8R089 466 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ptcd2Q8R3K3 381 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Dennd6bQ9D9V7 585 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Prl8a8Q9DAS4 241 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Acox3Q9EPL9 700 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cyhr1Q9QXA1 311 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ppp1r17Q9Z2E4 159 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Fam43bA2AM80 330 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Gm17333C6EQI3 125 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Rnf165E9QAU8 347 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn1r31L7N2F1 303 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Opn1mwO35599 359 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Nkx3-2P97503 333 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Cyp1b1Q64429 543 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tusc1Q673H1 205 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 RimklaQ6PFX8 380 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Il20raQ6PHB0 546 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Wdr92Q8BGF3 357 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Slc30a8Q8BGG0 367 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Krt33aQ8K0Y2 404 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn1r210Q8R274 306 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tcf19Q99KJ5 263 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Mrpl54Q9CPW3 135 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Ceacam20Q9D2Z1 577 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Pebp4Q9D9G2 242 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem176bQ9R1Q6 263 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp68Q9Z116 606 aa9.66□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Btbd35f16A0A087WSN2 498 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Saxo1B1AXP3 476 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Tmem44E9Q4M0 433 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Zfp994J3QM38 661 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Vmn2r124K7N789 855 aa9.65□□□□□ -0.86
Ccdc40-201ENSMUST00000035935 Edil3O35474 480 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms