RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 RBPMSQ93062 196 aaKnown RBP16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 PEX11GQ96HA9 241 aa16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 OR1F2PQ96R84 312 aa16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 SLC2A11Q9BYW1 496 aa16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 NWD2Q9ULI1 1742 aa16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 CBY3A6NI87 242 aa16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 J3KTA2 159 aa16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 SMN1Q16637 294 aaKnown RBP16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 ZNF542PQ5EBM4 170 aa16.17■□□□□ 0.18
HNRNPU-217ENST00000638952 GGT3PA6NGU5 568 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 GAPDHSO14556 408 aaPredicted RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 HLA-AP01891 365 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 PGCP20142 388 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CST6Q15828 149 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 C18orf63Q68DL7 685 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CBLL1Q75N03 491 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CLEC14AQ86T13 490 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 BAGE3Q86Y29 109 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 BAGE2Q86Y30 109 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CYB561A3Q8NBI2 242 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 MUL1Q969V5 352 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 SNX18Q96RF0 628 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 PLEKHJ1Q9NW61 149 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 PTTG3PQ9NZH4 202 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 H3BUI4 141 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 RAD1O60671 282 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 KLK3P07288 261 aaPredicted RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 EIF2DP41214 584 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 PKDCCQ504Y2 493 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 FAM111BQ6SJ93 734 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CD163Q86VB7 1156 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 ACKR4Q9NPB9 350 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 A0A0B4J2A0 478 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 AGAP14A8MT82 685 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 SRPX2O60687 465 aaPredicted RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 ATXN1LP0C7T5 689 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 ERVFC1P60507 584 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 GPR50Q13585 617 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 HABP2Q14520 560 aaPredicted RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CST9LP1Q5W188 147 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 ZNF417Q8TAU3 575 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 ARRDC2Q8TBH0 407 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 ZMYND19Q96E35 227 aaPredicted RBP16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 MS4A4EQ96PG1 132 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 SHPKQ9UHJ6 478 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 POU2F3Q9UKI9 436 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 ALPLP05186 524 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 TFAP2AP05549 437 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 BMP4P12644 408 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CCR7P32248 378 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 NUDT1P36639 197 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 PER3P56645 1201 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CXADRP78310 365 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 TRAPPC6BQ86SZ2 158 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 HIF1ANQ9NWT6 349 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 NPAP1Q9NZP6 1156 aa16.16■□□□□ 0.18
HNRNPU-217ENST00000638952 CACNG3O60359 315 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 HLA-DMAP28067 261 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 PTGER1P34995 402 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.15■□□□□ 0.182e-10■■□□□ 11.7
HNRNPU-217ENST00000638952 RHOXF1Q8NHV9 184 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 NPRL2Q8WTW4 380 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 ZNF587Q96SQ5 575 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 FBXL2Q9UKC9 423 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 RASD1Q9Y272 281 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 MBLAC1A4D2B0 266 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 TNFRSF10AO00220 468 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 MMP12P39900 470 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 VIPR2P41587 438 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 RGRP47804 291 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 MBTPS1Q14703 1052 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 FIGLAQ6QHK4 219 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 TECPR1Q7Z6L1 1165 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 RETREG3Q86VR2 466 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 ZNF440Q8IYI8 595 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 TM9SF4Q92544 642 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 PURGQ9UJV8 347 aaKnown RBP16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 MPPED1O15442 326 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 HOXB5P09067 269 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 GABRB3P28472 473 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 CTXN1P60606 82 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 BDH1Q02338 343 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 GBX1Q14549 363 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 LCTLQ6UWM7 567 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 APOOLQ6UXV4 268 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 SPRED1Q7Z699 444 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 TMEM200AQ86VY9 491 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 SULF2Q8IWU5 870 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 ZNF230Q9UIE0 474 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 HNRNPA1P09651 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 ZNF888P0CJ79 500 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 CSF2RAP15509 400 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 ARSBP15848 533 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 NRARPQ7Z6K4 114 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 OR2T11Q8NH01 316 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 MZB1Q8WU39 189 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 EGLN2Q96KS0 407 aa16.15■□□□□ 0.18
HNRNPU-217ENST00000638952 GMEB2Q9UKD1 530 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms