RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PKD1L2Q7Z442 2459 aa6.11□□□□□ -1.43
UPF3B-205ENST00000636792 KIAA1549Q9HCM3 1950 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 TCRBV5S2A0A599 114 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 TCRBV3S1A0A5B6 114 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 DHRS12A0PJE2 317 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 OR14I1A6ND48 311 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 GJE1A6NN92 205 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 TFECO14948 347 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ADAMDEC1O15204 470 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 DNPH1O43598 174 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 CHP2O43745 196 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 SUSD5O60279 629 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 NME6O75414 186 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PDE5AO76074 875 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 IGHG3P01860 377 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PDGFAP04085 211 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 SEMG1P04279 462 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 HPNP05981 417 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 LINGO3P0C6S8 592 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 UBTFL6P0CB48 400 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 RAP2AP10114 183 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PNMTP11086 282 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 CHMP24386 653 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 GDF1P27539 372 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 AQP1P29972 269 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 APOBEC1P41238 236 aaKnown RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 CLK1P49759 484 aaKnown RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF136P52737 540 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 SMIM11AP58511 58 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ACTR3P61158 418 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PLGLB1Q02325 96 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 CHRNB3Q05901 458 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 DMTNQ08495 405 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 SELENBP1Q13228 472 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 SF3B4Q15427 424 aaKnown RBP eCLIP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 DUSP7Q16829 419 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PLPPR5Q32ZL2 321 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 KRTCAP3Q53RY4 240 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 NHSL2Q5HYW2 709 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 C1orf146Q5VVC0 180 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 WBP2NLQ6ICG8 309 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 AAGABQ6PD74 315 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 APOOLQ6UXV4 268 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 MARCH3Q86UD3 253 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 VRK2Q86Y07 508 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 OFCC1Q8IZS5 231 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 GTPBP8Q8N3Z3 284 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 LINC00471Q8N535 108 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 TMCO5AQ8N6Q1 288 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 RNF148Q8N7C7 305 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 WDSUB1Q8N9V3 476 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PAPD5Q8NDF8 572 aaKnown RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 GPR32P1Q8NGA4 272 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 OR5M3Q8NGP4 307 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PHF10Q8WUB8 498 aaKnown RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PYURFQ96I23 114 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 MPP4Q96JB8 637 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 BARD1Q99728 777 aaKnown RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 SLC19A3Q9BZV2 496 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 QRSL1Q9H0R6 528 aaKnown RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 PIF1Q9H611 641 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 GALNT9Q9HCQ5 603 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 IL1RAPQ9NPH3 570 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 DEPPQ9NTK1 212 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ACER3Q9NUN7 267 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ARMC1Q9NVT9 282 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ANKRD10Q9NXR5 420 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 TUBA8Q9NY65 449 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-205ENST00000636792 SELENONQ9NZV5 590 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 DKKL1Q9UK85 242 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ACAD8Q9UKU7 415 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 COL6A6A6NMZ7 2263 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 USP24Q9UPU5 2620 aa6.1□□□□□ -1.43
UPF3B-205ENST00000636792 ASPMQ8IZT6 3477 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 NCKAP5O14513 1909 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 NPIPA5A0A0B4J1W7 369 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 CENPVL1A0A0U1RR11 272 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 A0A1B0GVC2 190 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 TRAPPC13A5PLN9 417 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 NPIPA7E9PJI5 369 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF208O43345 1280 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 FZD7O75084 574 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 FKBP6O75344 327 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 BCAS1O75363 584 aaPredicted RBP6.09□□□□□ -1.43
UPF3B-205ENST00000636792 OR5F1O95221 314 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 NTN1O95631 604 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 ZNF682O95780 498 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 NUDT14O95848 222 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 EPPINO95925 133 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 ACTL6AO96019 429 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 OPN1SWP03999 348 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 FABP3P05413 133 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 FREM3P0C091 2139 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 NPIPA8P0DM63 369 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 NCK1P16333 377 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 PRKCAP17252 672 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 RHCEP18577 417 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 ATP6V1B2P21281 511 aa6.09□□□□□ -1.43
UPF3B-205ENST00000636792 DPP4P27487 766 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms