RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 GSDMCQ9BYG8 508 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 POLR2J2Q9GZM3 115 aaKnown RBP2.05□□□□□ -2.08
VBP1-204ENST00000625964 POLR2J3Q9H1A7 115 aaKnown RBP2.05□□□□□ -2.08
VBP1-204ENST00000625964 PATZ1Q9HBE1 687 aaKnown RBP2.05□□□□□ -2.08
VBP1-204ENST00000625964 VAT1LQ9HCJ6 419 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 ANAPC7Q9UJX3 599 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 ZNF225Q9UK10 706 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 OARD1Q9Y530 152 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 NEO1Q92859 1461 aa2.05□□□□□ -2.08
VBP1-204ENST00000625964 FHOD3Q2V2M9 1422 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 TRAPPC8Q9Y2L5 1435 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 A6NDX4 124 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 PP2D1A8MPX8 630 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 SULT2B1O00204 365 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 RASGRF2O14827 1237 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 STX7O15400 261 aaKnown RBP2.04□□□□□ -2.08
VBP1-204ENST00000625964 PAICSP22234 425 aaKnown RBP2.04□□□□□ -2.08
VBP1-204ENST00000625964 CALB2P22676 271 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 DPP4P27487 766 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 HTR1FP30939 366 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 PTGFRP43088 359 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 CSNK1G2P78368 415 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 SPP2Q13103 211 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 TRIP10Q15642 601 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 RAB12Q6IQ22 244 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 FAHD2BQ6P2I3 314 aaPredicted RBP2.04□□□□□ -2.08
VBP1-204ENST00000625964 FAM199XQ6PEV8 388 aaPredicted RBP2.04□□□□□ -2.08
VBP1-204ENST00000625964 RBM43Q6ZSC3 357 aaKnown RBP2.04□□□□□ -2.08
VBP1-204ENST00000625964 TMEM17Q86X19 198 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 CBWD2Q8IUF1 395 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 ZNF786Q8N393 782 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 FAM71E2Q8N5Q1 922 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 Q8N9W7 124 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 BLOC1S5Q8TDH9 187 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 FAM151AQ8WW52 585 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 FAHD2AQ96GK7 314 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 TMEM237Q96Q45 408 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 CITED1Q99966 193 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 AGPAT5Q9NUQ2 364 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 ANGPTL2Q9UKU9 493 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 MGAT4BQ9UQ53 548 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 UGT2A1Q9Y4X1 527 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 SLCO1B1Q9Y6L6 691 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 SPACA6W5XKT8 324 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 CDC42BPBQ9Y5S2 1711 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 TTC37Q6PGP7 1564 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 PREX1Q8TCU6 1659 aa2.04□□□□□ -2.08
VBP1-204ENST00000625964 A0A0U1RQV5 110 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 A0A1B0GWB2 263 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 HELTA6NFD8 242 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 SLITRK3O94933 977 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 SNAPINO95295 136 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 FUT1P19526 365 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 RABIFP47224 123 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 STARD6P59095 220 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 HSF2Q03933 536 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 CHRNB3Q05901 458 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 CUL1Q13616 776 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 GPNMBQ14956 572 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 CEBPEQ15744 281 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 TIGITQ495A1 244 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 CENPUQ71F23 418 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 LHFPL4Q7Z7J7 247 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 MTURNQ8N3F0 131 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 OR52B4Q8NGK2 314 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 MARCH1Q8TCQ1 289 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 AKR1E2Q96JD6 320 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 FAM111AQ96PZ2 611 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 TBX15Q96SF7 602 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 CHRDL1Q9BU40 450 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 RHOJQ9H4E5 214 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 DHX33Q9H6R0 707 aaKnown RBP2.03□□□□□ -2.08
VBP1-204ENST00000625964 CYTL1Q9NRR1 136 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 WRAP73Q9P2S5 460 aaPredicted RBP2.03□□□□□ -2.08
VBP1-204ENST00000625964 PRPF19Q9UMS4 504 aaKnown RBP2.03□□□□□ -2.08
VBP1-204ENST00000625964 DENND4BO75064 1496 aaPredicted RBP2.03□□□□□ -2.08
VBP1-204ENST00000625964 ARHGEF12Q9NZN5 1544 aa2.03□□□□□ -2.08
VBP1-204ENST00000625964 ZCCHC11Q5TAX3 1644 aaKnown RBP2.03□□□□□ -2.08
VBP1-204ENST00000625964 MAGI2Q86UL8 1455 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 FAM166BA8MTA8 275 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 JAK2O60674 1132 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 HCN1O60741 890 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 ZNF780AO75290 641 aaPredicted RBP2.02□□□□□ -2.09
VBP1-204ENST00000625964 VPS26AO75436 327 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 LALBAP00709 142 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 F10P00742 488 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 MMP1P03956 469 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 RNH1P13489 461 aaKnown RBP2.02□□□□□ -2.09
VBP1-204ENST00000625964 STMN1P16949 149 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 COX7A1P24310 79 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 KIF5BP33176 963 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 ASMTP46597 345 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 MTTPP55157 894 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 PRPS1P60891 318 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 RIPPLY1Q0D2K3 151 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 CCDC173Q0VFZ6 552 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 RAB40BQ12829 278 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 LINC01620Q4KN68 170 aa2.02□□□□□ -2.09
VBP1-204ENST00000625964 ZNF311Q5JNZ3 666 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms