RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 DPP10Q8N608 796 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 OR2V1Q8NHB1 315 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 PMM1Q92871 262 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 MRGPRX4Q96LA9 322 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 KLHL15Q96M94 604 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 ZFP3Q96NJ6 502 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 CPPED1Q9BRF8 314 aaPredicted RBP11.43□□□□□ -0.58
CD9-212ENST00000610354 SRXN1Q9BYN0 137 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 RABEP2Q9H5N1 569 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 RNF122Q9H9V4 155 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 A4GALTQ9NPC4 353 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 EXOSC3Q9NQT5 275 aaKnown RBP11.43□□□□□ -0.58
CD9-212ENST00000610354 SAR1AQ9NR31 198 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 ACER3Q9NUN7 267 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 RLIMQ9NVW2 624 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 LEF1Q9UJU2 399 aaPredicted RBP11.43□□□□□ -0.58
CD9-212ENST00000610354 PRDM4Q9UKN5 801 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 TRIM33Q9UPN9 1127 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 ZNF175Q9Y473 711 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 FREM1Q5H8C1 2179 aa11.43□□□□□ -0.58
CD9-212ENST00000610354 CGAP01215 116 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
CD9-212ENST00000610354 TROVE2P10155 538 aaKnown RBP eCLIP11.42□□□□□ -0.58
CD9-212ENST00000610354 ARAFP10398 606 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 GPX2P18283 190 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 PGCP20142 388 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 KLK2P20151 261 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 RYKP34925 604 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 SFTPDP35247 375 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 OPRM1P35372 400 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 RPS3AP61247 264 aaKnown RBP11.42□□□□□ -0.58
CD9-212ENST00000610354 EEF1A1P68104 462 aaKnown RBP11.42□□□□□ -0.58
CD9-212ENST00000610354 FADDQ13158 208 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 ADRM1Q16186 407 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 TMEM176BQ3YBM2 270 aaPredicted RBP11.42□□□□□ -0.58
CD9-212ENST00000610354 MRPL2Q5T653 305 aaKnown RBP11.42□□□□□ -0.58
CD9-212ENST00000610354 HBMQ6B0K9 141 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 ESPNLQ6ZVH7 1005 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 PLEKHM3Q6ZWE6 761 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 CHMP1BQ7LBR1 199 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 P4HA3Q7Z4N8 544 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 BTLAQ7Z6A9 289 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 CLIP4Q8N3C7 705 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 ATP6V1C2Q8NEY4 427 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 OR52P1PQ8NH57 321 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 TSPEARQ8WU66 669 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 WDR60Q8WVS4 1066 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 C10orf82Q8WW14 230 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 ST8SIA1Q92185 356 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 OSTF1Q92882 214 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 RNASE6Q93091 150 aaKnown RBP11.42□□□□□ -0.58
CD9-212ENST00000610354 STARD4Q96DR4 205 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 SFXN3Q9BWM7 321 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 BCL2L10Q9HD36 194 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 NDUFAF1Q9Y375 327 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 ANKHD1Q8IWZ3 2542 aaKnown RBP11.42□□□□□ -0.58
CD9-212ENST00000610354 LRBAP50851 2863 aa11.42□□□□□ -0.58
CD9-212ENST00000610354 PDZD2O15018 2839 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 A0A0G2JPF8 293 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 A0A1W2PNR3 127 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 CDHR4A6H8M9 788 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 HNRNPCL2B2RXH8 293 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 HNRNPCL3B7ZW38 293 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 HNRNPCL1O60812 293 aaKnown RBP11.41□□□□□ -0.58
CD9-212ENST00000610354 HNRNPCL4P0DMR1 293 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 PRG2P13727 222 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 IL7RP16871 459 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 ACAA2P42765 397 aaKnown RBP11.41□□□□□ -0.58
CD9-212ENST00000610354 CRISP3P54108 245 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 KRTAP10-9P60411 292 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 MERTKQ12866 999 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 EPS8Q12929 822 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 KLF10Q13118 480 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 SGCBQ16585 318 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 DHDDSQ86SQ9 333 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 COMTD1Q86VU5 262 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 ADGRG3Q86Y34 549 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 CMIPQ8IY22 773 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 NFKBIDQ8NI38 313 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 ROBO4Q8WZ75 1007 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 ANKRD27Q96NW4 1050 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 CCDC106Q9BWC9 280 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 RAD21L1Q9H4I0 556 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 CTPS2Q9NRF8 586 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 CALML5Q9NZT1 146 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 KLHL14Q9P2G3 628 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 CLEC4AQ9UMR7 237 aa11.41□□□□□ -0.58
CD9-212ENST00000610354 ZNF443Q9Y2A4 671 aaPredicted RBP11.41□□□□□ -0.58
CD9-212ENST00000610354 EEF1E1-BLOC1S5C9J1V9 151 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 EEF1E1O43324 174 aaKnown RBP11.4□□□□□ -0.58
CD9-212ENST00000610354 PGM3O95394 542 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 CRHP06850 196 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 GKN3PP0CG01 181 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 ME2P23368 584 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 UQCRC1P31930 480 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 IDH2P48735 452 aaKnown RBP11.4□□□□□ -0.58
CD9-212ENST00000610354 CARD18P57730 90 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 SIRPAP78324 504 aa11.4□□□□□ -0.58
CD9-212ENST00000610354 SELENBP1Q13228 472 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms