RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 INAFM2P0DMQ5 153 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 CD22P20273 847 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 HIST1H2ADP20671 130 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 SYT1P21579 422 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 RPS3P23396 243 aaKnown RBP eCLIP1.97□□□□□ -2.09
CTC1-207ENST00000580299 CPT2P23786 658 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 CMA1P23946 247 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ELK4P28324 431 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 GTF2E2P29084 291 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 EVI2BP34910 448 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ELK3P41970 407 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ECI1P42126 302 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 SSR2P43308 183 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ALDH3B1P43353 468 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ASMTP46597 345 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 PIK3CGP48736 1102 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 NR2C2P49116 596 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 FNTAP49354 379 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 EMDP50402 254 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 PGGT1BP53609 377 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 NAP1L1P55209 391 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 ERVFRD-1P60508 538 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 CCL8P80075 99 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 GALK2Q01415 458 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 PNOCQ13519 176 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 PDE7AQ13946 482 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 TPD52L1Q16890 204 aaPredicted RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 AP5B1Q2VPB7 878 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ACSBG2Q5FVE4 666 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 KHDC1LQ5JSQ8 128 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 XP32Q5T750 250 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 GKAP1Q5VSY0 366 aaPredicted RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 CLEC6AQ6EIG7 209 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 UGT3A1Q6NUS8 523 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 RANBP10Q6VN20 620 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 Q6ZS46 218 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 RAPH1Q70E73 1250 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 LARP4Q71RC2 724 aaKnown RBP eCLIP1.97□□□□□ -2.09
CTC1-207ENST00000580299 APTXQ7Z2E3 356 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 TMPRSS11BQ86T26 416 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 PTOV1Q86YD1 416 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 RFX6Q8HWS3 928 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 LILRA2Q8N149 483 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ZNF567Q8N184 647 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 KRT78Q8N1N4 520 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 GTPBP8Q8N3Z3 284 aaPredicted RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 TMCO5AQ8N6Q1 288 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 PQLC3Q8N755 202 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 NIPA2Q8N8Q9 360 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ANKRD53Q8N9V6 530 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 WDR31Q8NA23 367 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 MGARPQ8TDB4 240 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 RAB40AQ8WXH6 277 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ALG3Q92685 438 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 TMBIM1Q969X1 311 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ADIPOR1Q96A54 375 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ARL8AQ96BM9 186 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 MS4A6EQ96DS6 147 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ZHX1-C8orf76Q96EF9 292 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 SLC35A4Q96G79 324 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 SNF8Q96H20 258 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 HIST1H2AHQ96KK5 128 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 NSUN5Q96P11 429 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 OLFM3Q96PB7 478 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ZNF317Q96PQ6 595 aaPredicted RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 RNF157Q96PX1 679 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ADOQ96SZ5 270 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 TCF12Q99081 682 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 HIST1H2AJQ99878 128 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 MAPKAP1Q9BPZ7 522 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 RHOXF2Q9BQY4 288 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 TM2D3Q9BRN9 247 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 CENPKQ9BS16 269 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 PCGF1Q9BSM1 259 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 H2AFJQ9BTM1 129 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 LRRC1Q9BTT6 524 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 CDADC1Q9BWV3 514 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 SSBP3Q9BWW4 388 aaPredicted RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 TBL1XR1Q9BZK7 514 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 REXO4Q9GZR2 422 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 EGLN1Q9GZT9 426 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 VPS11Q9H270 941 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ACSS3Q9H6R3 686 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 TMEM185BQ9H7F4 350 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 CNOT10Q9H9A5 744 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 CXorf21Q9HAI6 301 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 SAP30LQ9HAJ7 183 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 INPP5EQ9NRR6 644 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 DDX56Q9NY93 547 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 B3GAT1Q9P2W7 334 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 MALT1Q9UDY8 824 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 TRIM33Q9UPN9 1127 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 VDAC3Q9Y277 283 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 ZNF256Q9Y2P7 627 aaPredicted RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 SIGLEC9Q9Y336 463 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 REXO2Q9Y3B8 237 aaKnown RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 TSSC4Q9Y5U2 329 aaPredicted RBP1.97□□□□□ -2.09
CTC1-207ENST00000580299 DNAH6Q9C0G6 4158 aa1.97□□□□□ -2.09
CTC1-207ENST00000580299 IGHV2OR16-5A0A0B4J2B6 119 aa1.96□□□□□ -2.1
CTC1-207ENST00000580299 IGHV1-69DA0A0B4J2H0 117 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms