RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 C15orf38-AP3S2A0A0A6YYH1 394 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 ZNF716A6NP11 495 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 SAP18O00422 153 aaKnown RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 MFN2O95140 757 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 CTDNEP1O95476 244 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 ECDO95905 644 aaPredicted RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 AGTP01019 485 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 PCCBP05166 539 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 ZNF735P0CB33 412 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 AREGP15514 252 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 FASP25445 335 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 U2AF2P26368 475 aaKnown RBP eCLIP3.86□□□□□ -1.79
NUP88-213ENST00000576862 HMGB2P26583 209 aaKnown RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 CTNNB1P35222 781 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 SMSP52788 366 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 NME5P56597 212 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 GSTO1P78417 241 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 OVGP1Q12889 678 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 COTL1Q14019 142 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 PDIA5Q14554 519 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 SLC15A2Q16348 729 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 AANATQ16613 207 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 CGB2Q6NT52 195 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 BIVMQ86UB2 503 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 AMZ2Q86W34 360 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 C12orf56Q8IXR9 622 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 EFCAB13Q8IY85 973 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 BHLHE23Q8NDY6 225 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 CLHC1Q8NHS4 586 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 ST7LQ8TDW4 575 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 DDI1Q8WTU0 396 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 SDR42E1Q8WUS8 393 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 NT5C3BQ969T7 300 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 EFHD2Q96C19 240 aaPredicted RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 RAB3CQ96E17 227 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 RPGRIP1Q96KN7 1286 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 SPAG8Q99932 426 aaPredicted RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 JPH2Q9BR39 696 aaPredicted RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 GPR61Q9BZJ8 451 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 TDRD3Q9H7E2 651 aaKnown RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 LZTFL1Q9NQ48 299 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 ABCC13Q9NSE7 274 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 NUDT15Q9NV35 164 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 MBD2Q9UBB5 411 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 B4GALT7Q9UBV7 327 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 TRIM10Q9UDY6 481 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 TRMT6Q9UJA5 497 aaKnown RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 FBXW2Q9UKT8 454 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 ANGPTL2Q9UKU9 493 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 DNPEPQ9ULA0 475 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 DIMT1Q9UNQ2 313 aaKnown RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 STRAPQ9Y3F4 350 aaKnown RBP3.86□□□□□ -1.79
NUP88-213ENST00000576862 LY75O60449 1722 aa3.86□□□□□ -1.79
NUP88-213ENST00000576862 CROCCQ5TZA2 2017 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 DDX60Q8IY21 1712 aaKnown RBP3.85□□□□□ -1.79
NUP88-213ENST00000576862 ZNF318Q5VUA4 2279 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 ANKRD36CQ5JPF3 1778 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 A0A075B6Q4 140 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 A0A087WZY1 265 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 KLF18A0A0U1RQI7 1052 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 YJEFN3A6XGL0 299 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 TRDMT1O14717 391 aaKnown RBP3.85□□□□□ -1.79
NUP88-213ENST00000576862 MED7O43513 233 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 PTBP3O95758 552 aaKnown RBP3.85□□□□□ -1.79
NUP88-213ENST00000576862 HSD17B1P14061 328 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 PPP2R1BP30154 601 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 ACTR3P61158 418 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 UBE2HP62256 183 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 DR1Q01658 176 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 TNFRSF17Q02223 184 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 PDZK1IP1Q13113 114 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 NCF4Q15080 339 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 CCDC14Q49A88 953 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 MPPE1Q53F39 396 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 FAM219BQ5XKK7 198 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 RAET1GQ6H3X3 334 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 STEAP1BQ6NZ63 245 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 ARSKQ6UWY0 536 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 DEFB132Q7Z7B7 95 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 ZNF573Q86YE8 665 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 SLC22A9Q8IVM8 553 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 BATF2Q8N1L9 274 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 RNF10Q8N5U6 811 aaKnown RBP3.85□□□□□ -1.79
NUP88-213ENST00000576862 TRPV1Q8NER1 839 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 BBS1Q8NFJ9 593 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 OR52J3Q8NH60 311 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 FBXO25Q8TCJ0 367 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 TBCKQ8TEA7 893 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 TMIGD2Q96BF3 282 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 CCDC51Q96ER9 411 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 ZBED6CLQ96FA7 236 aaPredicted RBP3.85□□□□□ -1.79
NUP88-213ENST00000576862 SERAC1Q96JX3 654 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 SECISBP2Q96T21 854 aaKnown RBP3.85□□□□□ -1.79
NUP88-213ENST00000576862 COQ7Q99807 217 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 EDEM2Q9BV94 578 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 OSBPL10Q9BXB5 764 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 TBC1D10AQ9BXI6 508 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 GANQ9H2C0 597 aa3.85□□□□□ -1.79
NUP88-213ENST00000576862 AZI2Q9H6S1 392 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms