RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ME2P23368 584 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 EIF1AXP47813 144 aaKnown RBP11.93□□□□□ -0.5
RPAIN-216ENST00000575599 RPS3AP61247 264 aaKnown RBP11.93□□□□□ -0.5
RPAIN-216ENST00000575599 FOXF2Q12947 444 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 SKP2Q13309 424 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 FGFBP1Q14512 234 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 SGCBQ16585 318 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 LRIF1Q5T3J3 769 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 MEX3BQ6ZN04 569 aaKnown RBP11.93□□□□□ -0.5
RPAIN-216ENST00000575599 GGNQ86UU5 652 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 OR5W2Q8NH69 310 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 GPR119Q8TDV5 335 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 FIG4Q92562 907 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 INTS12Q96CB8 462 aaKnown RBP11.93□□□□□ -0.5
RPAIN-216ENST00000575599 ZG16BQ96DA0 208 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 SAP130Q9H0E3 1048 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 SLC38A1Q9H2H9 487 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 RAD21L1Q9H4I0 556 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 RUBCNLQ9H714 662 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 SPAG4Q9NPE6 437 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 SLAMF8Q9P0V8 285 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 STOML1Q9UBI4 398 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 CORO2BQ9UQ03 480 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 HCFC1P51610 2035 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 CLDN24A6NM45 220 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 EEF1E1-BLOC1S5C9J1V9 151 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 CLIC1O00299 241 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 GSC2O15499 205 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 EEF1E1O43324 174 aaKnown RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 BCAS1O75363 584 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 STAMBPO95630 424 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 PRKCAP17252 672 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 IL11P20809 199 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 CTSSP25774 331 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 PSMA4P25789 261 aaKnown RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SFTPDP35247 375 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 CPOXP36551 454 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 EIF1P41567 113 aaKnown RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 PON3Q15166 354 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 QPRTQ15274 297 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 DLEU7Q6UYE1 221 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 LRRC74BQ6ZQY2 392 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 METTL25Q8N6Q8 603 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ATP6V1C2Q8NEY4 427 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 UCN2Q96RP3 112 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 CDRT15Q96T59 188 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ECSITQ9BQ95 431 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SLC39A3Q9BRY0 314 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 LAT2Q9GZY6 243 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 MMADHCQ9H3L0 296 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SLC25A37Q9NYZ2 338 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF629Q9UEG4 869 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 PRPF19Q9UMS4 504 aaKnown RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SLC35A3Q9Y2D2 325 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 GPC6Q9Y625 555 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 TMEM247A6NEH6 219 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 CFAP73A6NFT4 308 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 TNFSF11O14788 317 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 RCBTB2O95199 551 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 PRF1P14222 555 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 HOXB9P17482 250 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ELK4P28324 431 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 UQCRC1P31930 480 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 RYKP34925 604 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 OPRM1P35372 400 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 MAGEA8P43361 318 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ASCL1P50553 236 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SLC7A2P52569 658 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 CRISP3P54108 245 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 RAC1P63000 192 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 KCNJ10P78508 379 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 RGNQ15493 299 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 MAPK11Q15759 364 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 RUNDC3AQ59EK9 446 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 RPS26P11Q5JNZ5 115 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SAMD4BQ5PRF9 694 aaKnown RBP11.92□□□□□ -0.5
RPAIN-216ENST00000575599 NANOGP8Q6NSW7 305 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 POMZP3Q6PJE2 187 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 MCEMP1Q8IX19 187 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 MSRB3Q8IXL7 192 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 LILRA2Q8N149 483 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 OR8J3Q8NGG0 315 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 OR10D3Q8NH80 312 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 FNDC9Q8TBE3 224 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SLC38A5Q8WUX1 472 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 WDR60Q8WVS4 1066 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 OIT3Q8WWZ8 545 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF524Q96C55 264 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 TMEM19Q96HH6 336 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ZFP3Q96NJ6 502 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 ANKRD27Q96NW4 1050 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 SFXN3Q9BWM7 321 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 NANOGQ9H9S0 305 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 CALML5Q9NZT1 146 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 VAPAQ9P0L0 249 aa11.92□□□□□ -0.5
RPAIN-216ENST00000575599 HEATR5AQ86XA9 2040 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 AGAP5A6NIR3 686 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms