RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 OR1K1Q8NGR3 316 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 MAGEE2Q8TD90 523 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 DTX3LQ8TDB6 740 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 BIRC7Q96CA5 298 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 CXorf40BQ96DE9 158 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 NUS1Q96E22 293 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF641Q96N77 438 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF385AQ96PM9 386 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 CYTH2Q99418 400 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 NKX3-1Q99801 234 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC29A1Q99808 456 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 MAPKAP1Q9BPZ7 522 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OVOL2Q9BRP0 275 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 MCRIP2Q9BUT9 160 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 RBM4Q9BWF3 364 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 GPR174Q9BXC1 333 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 TM6SF2Q9BZW4 377 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 FKRPQ9H9S5 495 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 BEX1Q9HBH7 125 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 MYOZ2Q9NPC6 264 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 ESM1Q9NQ30 184 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 RCOR3Q9P2K3 495 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 CTSFQ9UBX1 484 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 EIF3LQ9Y262 564 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 DHRS7Q9Y394 339 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OARD1Q9Y530 152 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 PCDHGB1Q9Y5G3 927 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 COX11Q9Y6N1 276 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 CHD4Q14839 1912 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 TOPBP1Q92547 1522 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 FRMPD4Q14CM0 1322 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 NCOA1Q15788 1441 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 TNS2Q63HR2 1409 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 FANCAO15360 1455 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 GRIN2BQ13224 1484 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 WDR7Q9Y4E6 1490 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 A0A1W2PPV9 198 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 NKX6-3A6NJ46 265 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CCT8L1PA6NM43 557 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 TRPC5OSA6NMA1 111 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRIQ3A6PVS8 624 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 PDZK1P1A8MUH7 402 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ARHGEF33A8MVX0 844 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 H3BNX3 289 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 PDLIM1O00151 329 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 RAB29O14966 203 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SURF4O15260 269 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 NIPSNAP2O75323 286 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CABYRO75952 493 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 AP2A1O95782 977 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SNAI1O95863 264 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 GPIP06744 558 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 NGFRP08138 427 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 FRMD6-AS1P0C7T7 363 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 PSG1P11464 419 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CCL2P13500 99 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LIFP15018 202 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CD1DP15813 335 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 KITLGP21583 273 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 BCKDHBP21953 392 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 EDNRAP25101 427 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CD82P27701 267 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 OXTRP30559 389 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 GPR183P32249 361 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 RPL4P36578 427 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 QARSP47897 775 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 POU3F4P49335 361 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC26A2P50443 739 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 RIPK4P57078 832 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SKP1P63208 163 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LTBQ06643 244 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CDH17Q12864 832 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SELENBP1Q13228 472 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SRSF9Q13242 221 aaKnown RBP eCLIP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ART3Q13508 389 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 TRIP6Q15654 476 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ECSCRQ19T08 205 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 TRIM16LQ309B1 348 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SOHLH1Q5JUK2 328 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LY6G6FQ5SQ64 297 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 C9orf135Q5VTT2 229 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ATRAIDQ6UW56 229 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRC74BQ6ZQY2 392 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CHMP1BQ7LBR1 199 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 PTF1AQ7RTS3 328 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 PRSS48Q7RTY5 328 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 PIP4P1Q86T03 277 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 ERO1BQ86YB8 467 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 RBM45Q8IUH3 476 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 LRRC8AQ8IWT6 810 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 NELFCDQ8IXH7 590 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 SELENOHQ8IZQ5 122 aaKnown RBP2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CMTM8Q8IZV2 173 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 MTURNQ8N3F0 131 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 CSNK1A1LQ8N752 337 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 FBXO36Q8NEA4 188 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 OR10H4Q8NGA5 316 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4D10Q8NGI6 311 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 OR6F1Q8NGZ6 308 aa2.86□□□□□ -1.95
HERPUD1-211ENST00000566550 C16orf52Q8NHV5 167 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms