RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 GPRIN2O60269 458 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 HTR3BO95264 441 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 SLC10A3P09131 477 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 RAC2P15153 192 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 MMP12P39900 470 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 RAP2BP61225 183 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 CDK3Q00526 305 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF542PQ5EBM4 170 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF322Q6U7Q0 402 aaPredicted RBP13.07□□□□□ -0.32
VTI1B-204ENST00000554659 Q6ZNX1 250 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 FAM109AQ8N4B1 249 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
VTI1B-204ENST00000554659 OR4F15Q8NGB8 312 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 TESQ9UGI8 421 aaKnown RBP13.07□□□□□ -0.32
VTI1B-204ENST00000554659 TRBV4-1A0A0J9YWV2 114 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 P2RX6O15547 441 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 TPPPO94811 219 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 MMP2P08253 660 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 TAS2R20P59543 309 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 HOXC5Q00444 222 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 RPL22L1Q6P5R6 122 aaKnown RBP13.07□□□□□ -0.32
VTI1B-204ENST00000554659 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 SLC35F3Q8IY50 421 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 BORCS7Q96B45 105 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 TCEAL7Q9BRU2 100 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 RARRES3Q9UL19 164 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 FAM230AA0A1W2PPH8 454 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 OR52A4PA6NMU1 304 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 GJE1A6NN92 205 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 ANKRD28O15084 1053 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 CACNG3O60359 315 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 SEMA4FO95754 770 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 C4AP0C0L4 1744 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 C4BP0C0L5 1744 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 GJA5P36382 358 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 BMPR1AP36894 532 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 TAS2R19P59542 299 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 DEFB110Q30KQ9 67 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 UNQ6126/PRO20091Q6UXV3 157 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.07□□□□□ -0.323e-7■■■□□ 16.7
VTI1B-204ENST00000554659 Q6ZPB1 254 aaPredicted RBP13.07□□□□□ -0.32
VTI1B-204ENST00000554659 Q6ZSR9 355 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 DNAJC5GQ8N7S2 189 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 L3MBTL4Q8NA19 623 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 BBS1Q8NFJ9 593 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 OR56B4Q8NH76 319 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 STRADBQ9C0K7 418 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 C8orf33Q9H7E9 229 aaPredicted RBP13.07□□□□□ -0.32
VTI1B-204ENST00000554659 HSFX1Q9UBD0 423 aa13.07□□□□□ -0.32
VTI1B-204ENST00000554659 MEIS3P1A6NDR6 274 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 GGT3PA6NGU5 568 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 TGM6O95932 706 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 MT-CO2P00403 227 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 PROS1P07225 676 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SLC7A9P82251 487 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 P2RY14Q15391 338 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 OR1Q1Q15612 314 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 EEF1A1P5Q5VTE0 462 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 RNF113BQ8IZP6 322 aaKnown RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 RANGRFQ9HD47 186 aaPredicted RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SERTAD4Q9NUC0 356 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 RGPD2P0DJD1 1756 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 C17orf105B2RV13 164 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 GJB3O75712 270 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 JMJD7P0C870 316 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 TACR1P25103 407 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 CD79BP40259 229 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 OR2G6Q5TZ20 316 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 STEAP3Q658P3 488 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 NPRL2Q8WTW4 380 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SMIM14Q96QK8 99 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 GMPR2Q9P2T1 348 aaKnown RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 TRAV27A0A087WT01 109 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 ANKRD33BA6NCL7 494 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 A6NIN4 97 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 A8MXE2 369 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SHOXO15266 292 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SNAPINO95295 136 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SERPINA5P05154 406 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 C1SP09871 688 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 LIPCP11150 499 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 ACPPP15309 386 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 CHATP28329 748 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 POLR2IP36954 125 aaKnown RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 BTN1A1Q13410 526 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 PRAMEF8Q5VWM4 474 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 PRAMEF7Q5VXH5 474 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 TSSK4Q6SA08 328 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SUMF2Q8NBJ7 301 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 INIPQ9NRY2 104 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 PLCXD1Q9NUJ7 323 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 HHLA2Q9UM44 414 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 FAM183AA6NL82 134 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 LILRB3O75022 631 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 UBBP0CG47 229 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms