RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 H2AFXP16104 143 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 SRMP19623 302 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 IMPDH1P20839 514 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 C4BPBP20851 252 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 GSTM3P21266 225 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 MSR1P21757 451 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ATP5A1P25705 553 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 U2AF2P26368 475 aaKnown RBP eCLIP1.89□□□□□ -2.118e-6■■■□□ 17.9
SRP54-204ENST00000553923 GCAP28676 217 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 GNA11P29992 359 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 MAT2AP31153 395 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 UGT1A5P35504 534 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 SOX3P41225 446 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 SLC1A2P43004 574 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 MAGEA9P43362 315 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 NAMPTP43490 491 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 GNPDA1P46926 289 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 OR3A2P47893 321 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 P2RY1P47900 373 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 UQCRFS1P47985 274 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PLP1P60201 277 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 RPS27AP62979 156 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 TNNC1P63316 161 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 IL9RQ01113 521 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PLOD1Q02809 727 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 GCKRQ14397 625 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 GPR176Q14439 515 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 EMC2Q15006 297 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 P2RY6Q15077 328 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 RAB35Q15286 201 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 TEAD2Q15562 447 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 HAGHQ16775 308 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ECSCRQ19T08 205 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 UNC50Q53HI1 259 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 SFT2D3Q587I9 215 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 LIN9Q5TKA1 542 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PDPK2PQ6A1A2 396 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 RHBDD2Q6NTF9 364 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 NEPROQ6NW34 567 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PAQR6Q6TCH4 344 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 HACD2Q6Y1H2 254 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 CYS1Q717R9 158 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 SSX9Q7RTT3 188 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 APTXQ7Z2E3 356 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 H2BFWTQ7Z2G1 175 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ANKRD37Q7Z713 158 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PIGZQ86VD9 579 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 COMTD1Q86VU5 262 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 TPRA1Q86W33 373 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 CATSPERDQ86XM0 798 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 RNF130Q86XS8 419 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 HPS6Q86YV9 775 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 GABRG1Q8N1C3 465 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 GTPBP8Q8N3Z3 284 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 CSGALNACT2Q8N6G5 542 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ZSCAN4Q8NAM6 433 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 TMEM104Q8NE00 496 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 OR4K14Q8NGD5 310 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 OR9Q2Q8NGE9 314 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 OR1L3Q8NH93 324 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 C8orf46Q8TAG6 207 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 RHEBL1Q8TAI7 183 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 FAM110BQ8TC76 370 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 LRRC20Q8TCA0 184 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 MITD1Q8WV92 249 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ELMO1Q92556 727 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 KIFAP3Q92845 792 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ADIPOR1Q96A54 375 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 TM4SF19Q96DZ7 209 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 C12orf42Q96LP6 360 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 CLCC1Q96S66 551 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 SLC6A7Q99884 636 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 FUCA2Q9BTY2 467 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PRRG3Q9BZD7 231 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 MRPL37Q9BZE1 423 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 COMMD4Q9H0A8 199 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 FBXO44Q9H4M3 255 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 RNF41Q9H4P4 317 aaPredicted RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 IKZF5Q9H5V7 419 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 ADGRL4Q9HBW9 690 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 TREM1Q9NP99 234 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 MRPL39Q9NYK5 338 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 PEF1Q9UBV8 284 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 TUBGCP4Q9UGJ1 667 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 PDE10AQ9Y233 779 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 STARD10Q9Y365 291 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 EXOSC1Q9Y3B2 195 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 GMEB1Q9Y692 573 aa1.89□□□□□ -2.11
SRP54-204ENST00000553923 EIF4G1Q04637 1599 aaKnown RBP1.89□□□□□ -2.11
SRP54-204ENST00000553923 NPIPA5A0A0B4J1W7 369 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 A0A1W2PPV4 95 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 RAB19A4D1S5 217 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR6C74A6NCV1 312 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NKX6-3A6NJ46 265 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 OR6C65A6NJZ3 312 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NPIPA7E9PJI5 369 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 NPIPA5E9PKD4 350 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 TRDMT1O14717 391 aaKnown RBP1.88□□□□□ -2.11
SRP54-204ENST00000553923 SURF4O15260 269 aa1.88□□□□□ -2.11
SRP54-204ENST00000553923 MSH4O15457 936 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms