RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SULT1C4O75897 302 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF23P17027 643 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 IGFBP2P18065 325 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TACR1P25103 407 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ABCD3P28288 659 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 CAPGP40121 348 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 DCTP40126 519 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 LSM6P62312 80 aaKnown RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SLC35A2P78381 396 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SLAMF1Q13291 335 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 NFYCQ13952 458 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 VWA5B1Q5TIE3 1220 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 WBP2NLQ6ICG8 309 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 OR2T5Q6IEZ7 315 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 FAM166AQ6J272 317 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 Q6ZS92 163 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 RAB43Q86YS6 212 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 LILRA3Q8N6C8 439 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 OR7G2Q8NG99 324 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 OR2T29Q8NH02 315 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 OR5W2Q8NH69 310 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 GPR148Q8TDV2 347 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ASB13Q8WXK3 278 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 RCN3Q96D15 328 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 BDH2Q9BUT1 245 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 LINC00574Q9H8X3 128 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ACTR8Q9H981 624 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 BPIFA1Q9NP55 256 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 KRCC1Q9NPI7 259 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 UBQLN4Q9NRR5 601 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TAC3Q9UHF0 121 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ASF1AQ9Y294 204 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 HCFC1P51610 2035 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 AP3D1O14617 1153 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 CHST10O43529 356 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 GDF9O60383 454 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 EIF4EBP3O60516 100 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ALOX12BO75342 701 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF254O75437 659 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SERPINB7O75635 380 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 APOL3O95236 402 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 MAPK12P53778 367 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 FXYD6P3P58550 94 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SIM1P81133 766 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 EGR3Q06889 387 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 LSAMPQ13449 338 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SGCBQ16585 318 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 CR1LQ2VPA4 569 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF836Q6ZNA1 936 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 C6orf120Q7Z4R8 191 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ANKRD13BQ86YJ7 626 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SETD9Q8NE22 299 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM190Q8WZ59 177 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 NXPE2Q96DL1 559 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 MTFMTQ96DP5 389 aaKnown RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SLC35G5Q96KT7 338 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 HSPA12BQ96MM6 686 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ECSITQ9BQ95 431 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 KRTAP3-2Q9BYR7 98 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TPK1Q9H3S4 243 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 KLHL31Q9H511 634 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SDHAF3Q9NRP4 125 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TM7SF3Q9NS93 570 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 FAM212BQ9NTI7 297 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 UCKL1Q9NWZ5 548 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 LRIT1Q9P2V4 623 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TESMINQ9Y4I5 508 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 OR1A2Q9Y585 309 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SDK2Q58EX2 2172 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TRBV5-5A0A0J9YX44 114 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 MBD3L4A6NDZ8 208 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 MBD3L3A6NE82 208 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 FOXI3A8MTJ6 420 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 CYTIPO60759 359 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ITGA5P08648 1049 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 NR2C1P13056 603 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 FOSL1P15407 271 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 VAMP2P63027 116 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TSTA3Q13630 321 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SF3B4Q15427 424 aaKnown RBP eCLIP4.43□□□□□ -1.78e-9■■■□□ 16.8
SCAF11-212ENST00000549162 PLPPR5Q32ZL2 321 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 Q3ZCU0 254 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 FAM98BQ52LJ0 330 aaKnown RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SPANXN4Q5MJ08 99 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 NXNL2Q5VZ03 156 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SHEQ5VZ18 495 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TTC23Q5W5X9 447 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 SAXO1Q8IYX7 474 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 OR2T12Q8NG77 320 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 MBD3L2Q8NHZ7 208 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 RERGQ96A58 199 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF837Q96EG3 531 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 DMRTA2Q96SC8 542 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 PIGMQ9H3S5 423 aa4.43□□□□□ -1.7
SCAF11-212ENST00000549162 POLR3HQ9Y535 204 aaPredicted RBP4.43□□□□□ -1.7
SCAF11-212ENST00000549162 TBC1D3DA0A087WVF3 549 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TRBV6-6A0A0A6YYG2 114 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms