RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 WWTR1Q9GZV5 400 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 EXOSC3Q9NQT5 275 aaKnown RBP6.01□□□□□ -1.45
CDCA3-209ENST00000544610 UBQLN4Q9NRR5 601 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 PNO1Q9NRX1 252 aaKnown RBP6.01□□□□□ -1.45
CDCA3-209ENST00000544610 KLHL28Q9NXS3 571 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 LRFN1Q9P244 771 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 DNAJB9Q9UBS3 223 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 ACAD8Q9UKU7 415 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 CBLCQ9ULV8 474 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 SLC35A3Q9Y2D2 325 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 VPS13CQ709C8 3753 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 ZGRF1Q86YA3 2104 aa6.01□□□□□ -1.45
CDCA3-209ENST00000544610 DIDO1Q9BTC0 2240 aaKnown RBP6.01□□□□□ -1.45
CDCA3-209ENST00000544610 PRAMEF27A3QJZ7 478 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 ALG1L2C9J202 215 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 H3BNH8 94 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 HS6ST1O60243 411 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 PRKD3O94806 890 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 H6PDO95479 791 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 IGF2P01344 180 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 IFNW1P05000 195 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 CHRM4P08173 479 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 PABPC4LP0CB38 370 aaKnown RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 ANPEPP15144 967 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 RHCEP18577 417 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 CD247P20963 164 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 TBXA2RP21731 343 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SSTR4P31391 388 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 IFNA8P32881 189 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 GABRA3P34903 492 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 PTGER1P34995 402 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 KRT20P35900 424 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 CYB561P49447 251 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 MAP2K6P52564 334 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 CRYBA2P53672 197 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 RPP38P78345 283 aaKnown RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 KCNJ10P78508 379 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 TFF3Q07654 80 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 EXOSC7Q15024 291 aaKnown RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 RCN1Q15293 331 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 ATP6AP1Q15904 470 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SNCBQ16143 134 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SYPL1Q16563 259 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 NRF1Q16656 503 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 IQCCQ4KMZ1 466 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 GPAT3Q53EU6 434 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 KLHL26Q53HC5 615 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 TYW3Q6IPR3 259 aaKnown RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 CYP2R1Q6VVX0 501 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 C3P1Q6ZMU1 363 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 DGAT2L6Q6ZPD8 337 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 NUP54Q7Z3B4 507 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 CYP4Z1Q86W10 505 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 RPS19BP1Q86WX3 136 aaKnown RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 SLC44A2Q8IWA5 706 aaPredicted RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 C9orf40Q8IXQ3 194 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 MARVELD2Q8N4S9 558 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 ANKFN1Q8N957 763 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 POGLUT1Q8NBL1 392 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 OR5D16Q8NGK9 328 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 FAM57AQ8TBR7 257 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SLC22A8Q8TCC7 542 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SLC9A6Q92581 669 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 CDS1Q92903 461 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 RAB8BQ92930 207 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 MAL2Q969L2 176 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SLCO4A1Q96BD0 722 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 TAMM41Q96BW9 452 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SDCCAG3Q96C92 435 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SLC47A1Q96FL8 570 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 C16orf58Q96GQ5 468 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 SGCZQ96LD1 299 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 DHRS1Q96LJ7 313 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 RDH12Q96NR8 316 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 COL21A1Q96P44 957 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 PSD2Q9BQI7 771 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 VCXQ9H320 206 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 CDCP1Q9H5V8 836 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 COQ3Q9NZJ6 369 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 MYOTQ9UBF9 498 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 YARS2Q9Y2Z4 477 aaKnown RBP6□□□□□ -1.45
CDCA3-209ENST00000544610 OR10H1Q9Y4A9 318 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 NINQ8N4C6 2090 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 F8P00451 2351 aa6□□□□□ -1.45
CDCA3-209ENST00000544610 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 A0A1B0GTH9 108 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 A0A1W2PRQ8 180 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 CDHR4A6H8M9 788 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 TFECO14948 347 aaPredicted RBP5.99□□□□□ -1.45
CDCA3-209ENST00000544610 CLOCKO15516 846 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 EIF4E2O60573 245 aaKnown RBP5.99□□□□□ -1.45
CDCA3-209ENST00000544610 TSPAN2O60636 221 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 PPM1BO75688 479 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 FABP3P05413 133 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 FESP07332 822 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 IL7RP16871 459 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 ABCD3P28288 659 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 PTGS2P35354 604 aa5.99□□□□□ -1.45
CDCA3-209ENST00000544610 MSX2P35548 267 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms