RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CBLN3Q6UW01 205 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 NET1Q7Z628 596 aaPredicted RBP12.81□□□□□ -0.36
LTBR-209ENST00000541102 COMTD1Q86VU5 262 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 TMEM200AQ86VY9 491 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 ZNF614Q8N883 585 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 OR8J3Q8NGG0 315 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 PHOSPHO1Q8TCT1 267 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 FIG4Q92562 907 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 ZNF583Q96ND8 569 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 UCN2Q96RP3 112 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 NPAS1Q99742 590 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 HHATLQ9HCP6 504 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 GID8Q9NWU2 228 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 CRIM1Q9NZV1 1036 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 PACSIN3Q9UKS6 424 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 CHST2Q9Y4C5 530 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 DTNAQ9Y4J8 743 aa12.81□□□□□ -0.36
LTBR-209ENST00000541102 MED12LQ86YW9 2145 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 ADGRG4Q8IZF6 3080 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 DCHS2Q6V1P9 2916 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 A0A087WZY1 265 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 A0A1W2PQD3 144 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 AGAP5A6NIR3 686 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 SLC22A20A6NK97 555 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 HCRTR2O43614 444 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 ADAM11O75078 769 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 PGM3O95394 542 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 OPN1LWP04000 364 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 GUSBP08236 651 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 AQP1P29972 269 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 SLC7A2P52569 658 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 PSME3P61289 254 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 SLC25A3Q00325 362 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 CDK6Q00534 326 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 ZNF117Q03924 483 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 SCARB2Q14108 478 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 SGCBQ16585 318 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 CYP51A1Q16850 503 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 FBXL19-AS1Q494R0 122 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 PPP4R4Q6NUP7 873 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 HACD2Q6Y1H2 254 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 TRPM8Q7Z2W7 1104 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 B4GALNT2Q8NHY0 566 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 ZNF845Q96IR2 970 aaPredicted RBP12.8□□□□□ -0.36
LTBR-209ENST00000541102 ZFP3Q96NJ6 502 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 SFXN3Q9BWM7 321 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 PINK1Q9BXM7 581 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 HOXD1Q9GZZ0 328 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 TMEM38AQ9H6F2 299 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 POLE3Q9NRF9 147 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 FOXD3Q9UJU5 478 aaPredicted RBP12.8□□□□□ -0.36
LTBR-209ENST00000541102 CORO2BQ9UQ03 480 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 CARD8Q9Y2G2 431 aa12.8□□□□□ -0.36
LTBR-209ENST00000541102 HEATR5AQ86XA9 2040 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 MPDZO75970 2070 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 ANKHD1Q8IWZ3 2542 aaKnown RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 SERINC4A6NH21 518 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 H3BNH8 94 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 GTPBP1O00178 669 aaKnown RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 UBOX5O94941 541 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 CPOXP36551 454 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 ZNF41P51814 821 aaPredicted RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 CRYBA2P53672 197 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 CRISP3P54108 245 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 RPS3AP61247 264 aaKnown RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 SKP2Q13309 424 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 TMEM44Q2T9K0 475 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 RINLQ6ZS11 566 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 SERPINA11Q86U17 422 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 KIF18BQ86Y91 864 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 MISPQ8IVT2 679 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 CNEP1R1Q8N9A8 125 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 ZNF527Q8NB42 609 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 LINC01560Q8TB33 94 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 CNOT9Q92600 299 aaKnown RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 NSL1Q96IY1 281 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 ECSITQ9BQ95 431 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 TMEM185BQ9H7F4 350 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 MTHFD2LQ9H903 347 aaPredicted RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 BCL2L10Q9HD36 194 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 MED17Q9NVC6 651 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 RLIMQ9NVW2 624 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 THUMPD1Q9NXG2 353 aaKnown RBP12.79□□□□□ -0.36
LTBR-209ENST00000541102 JKAMPQ9P055 326 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 STOML1Q9UBI4 398 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 AP4B1Q9Y6B7 739 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 PDZD2O15018 2839 aa12.79□□□□□ -0.36
LTBR-209ENST00000541102 A0A0G2JPF8 293 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 A0A1W2PNV4 684 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 TUBAL3A6NHL2 446 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 HNRNPCL2B2RXH8 293 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 HNRNPCL3B7ZW38 293 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 EIF1AYO14602 144 aaKnown RBP12.78□□□□□ -0.36
LTBR-209ENST00000541102 HNRNPCL1O60812 293 aaKnown RBP12.78□□□□□ -0.36
LTBR-209ENST00000541102 SMNDC1O75940 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
LTBR-209ENST00000541102 NUDT14O95848 222 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 HNRNPCL4P0DMR1 293 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms