RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PANX1Q96RD7 426 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ACTR6Q9GZN1 396 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 NKIRAS1Q9NYS0 192 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 KLHL13Q9P2N7 655 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 GPR45Q9Y5Y3 372 aa16.99■□□□□ 0.31
TNFRSF1A-212ENST00000539372 CCDC154A6NI56 674 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ETV2O00321 342 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 HMGN4O00479 90 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 DNAJA2O60884 412 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PRKD3O94806 890 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 H6PDO95479 791 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 GSNP06396 782 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PGRP06401 933 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 LOXP28300 417 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PGM1P36871 562 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 CDKN2CP42773 168 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 CHRNEQ04844 493 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ATG16L1Q676U5 607 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ZNF621Q6ZSS3 439 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ZNF619Q8N2I2 560 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 WFDC11Q8NEX6 87 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ST8SIA1Q92185 356 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 OR5B2Q96R09 309 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ZBTB18Q99592 522 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MANSC1Q9H8J5 431 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TMBIM4Q9HC24 238 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 FANCFQ9NPI8 374 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 POLE3Q9NRF9 147 aa16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 BEX4Q9NWD9 120 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-212ENST00000539372 HEATR5AQ86XA9 2040 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 CLDN24A6NM45 220 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ERLIN1O75477 346 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 GUSBP08236 651 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PPP3CBP16298 524 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PGCP20142 388 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 RYKP34925 604 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 RAC3P60763 192 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 HPCAP84074 193 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TSC22D1Q15714 1073 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 BEND6Q5SZJ8 279 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ALKBH2Q6NS38 261 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 C3orf33Q6P1S2 294 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TFAP2EQ6VUC0 442 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PLEKHM3Q6ZWE6 761 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 CXorf67Q86X51 503 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 WFDC8Q8IUA0 241 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ANKFN1Q8N957 763 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 FAM71CQ8NEG0 241 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ZNF563Q8TA94 476 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 PNPT1Q8TCS8 783 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TMEM234Q8WY98 164 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ARL8AQ96BM9 186 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TLCD1Q96CP7 247 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SAP130Q9H0E3 1048 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ACER3Q9NUN7 267 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SLC35A3Q9Y2D2 325 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 C2CD3Q4AC94 2353 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MTORP42345 2549 aa16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MAP1AP78559 2803 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-212ENST00000539372 VPS13CQ709C8 3753 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 KLF4O43474 513 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 YES1P07947 543 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SLC18A1P54219 525 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SYPL1Q16563 259 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 ACKR1Q16570 336 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SLC9B1Q4ZJI4 515 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 COX20Q5RI15 118 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MAVSQ7Z434 540 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 LSRQ86X29 649 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 TRIML2Q8N7C3 387 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 SERINC1Q9NRX5 453 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 GPR52Q9Y2T5 361 aa16.96■□□□□ 0.31
TNFRSF1A-212ENST00000539372 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 SLCO1B7G3V0H7 640 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 SMAD9O15198 467 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 GCM2O75603 506 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 CHRM4P08173 479 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 PSMB1P20618 241 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 HOXC12P31275 282 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 NKX6-1P78426 367 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 KCNJ10P78508 379 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 PLAURQ03405 335 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 BEX5Q5H9J7 111 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 DNAJC14Q6Y2X3 702 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 KRTAP1-3Q8IUG1 177 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 SLC43A2Q8N370 569 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 RAB3IL1Q8TBN0 382 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 S100PBPQ96BU1 408 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 ZNF775Q96BV0 537 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 DNAJA3Q96EY1 480 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 CCL19Q99731 98 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 DLL4Q9NR61 685 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 CTPS2Q9NRF8 586 aa16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 ING1Q9UK53 422 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1A-212ENST00000539372 ZFHX3Q15911 3703 aa16.94■□□□□ 0.3
TNFRSF1A-212ENST00000539372 SMPD2O60906 423 aa16.94■□□□□ 0.3
TNFRSF1A-212ENST00000539372 ADAM11O75078 769 aa16.94■□□□□ 0.3
TNFRSF1A-212ENST00000539372 SLC22A3O75751 556 aa16.94■□□□□ 0.3
TNFRSF1A-212ENST00000539372 ADAP00813 363 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms