RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SHOXO15266 292 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RAB3DO95716 219 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 TFP02787 698 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 OR8U9P0C7N5 309 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 HLA-FP30511 346 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 MEX3DQ86XN8 651 aaKnown RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 SLC35F3Q8IY50 421 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RNF113BQ8IZP6 322 aaKnown RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ZFAND1Q8TCF1 268 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 SLC2A12Q8TD20 617 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RNF128Q8TEB7 428 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ATOH1Q92858 354 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 BORCS7Q96B45 105 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 HCAR1Q9BXC0 346 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 OTOL1A6NHN0 477 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 METTL15A6NJ78 407 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 J3KTA2 159 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 BCAT2O15382 392 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 YKT6O15498 198 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 AQP9O43315 295 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 GJA4P35212 333 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RAB5BP61020 215 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 COL9A2Q14055 689 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 USF2Q15853 346 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 C3orf38Q5JPI3 329 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 DEDD2Q8WXF8 326 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 NAT6Q93015 286 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 SGCZQ96LD1 299 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CPNE5Q9HCH3 593 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CHD4Q14839 1912 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 TOGARAM1Q9Y4F4 1720 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ZNF736B4DX44 427 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RRP8O43159 456 aaKnown RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 GPR75O95800 540 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CA5AP35218 305 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RGRP47804 291 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ATP1B3P54709 279 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RAB31Q13636 194 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 TMEM52BQ4KMG9 183 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 DCAF12Q5T6F0 453 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 MTFR2Q6P444 385 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 EID2Q8N6I1 236 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 BRIX1Q8TDN6 353 aaKnown RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ZNF597Q96LX8 424 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 AP1S3Q96PC3 154 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RTP3Q9BQQ7 232 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ZBP1Q9H171 429 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 TEX10Q9NXF1 929 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 V9GY05 133 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CDHR4A6H8M9 788 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 NUDT21O43809 227 aaKnown RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 HPGDSO60760 199 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ADAM23O75077 832 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CAPNS1P04632 268 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CD46P15529 392 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CHATP28329 748 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 PKLRP30613 574 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CXCR4P61073 352 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 CDKN3Q16667 212 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 OPN5Q6U736 354 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 SPARTQ8N0X7 666 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 PGBD5Q8N414 524 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 FAM160A2Q8N612 972 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 OR9K2Q8NGE7 335 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 NRG4Q8WWG1 115 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 TFAP2CQ92754 450 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 HLA-CQ95604 372 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ARRDC3Q96B67 414 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 SNX18Q96RF0 628 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ULBP3Q9BZM4 244 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 PRSS16Q9NQE7 514 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 PLEK2Q9NYT0 353 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 DNAJB11Q9UBS4 358 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 DCDC2BA2VCK2 349 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 B4DXG7 233 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 D6RAR5 112 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 UBFD1O14562 309 aaKnown RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 YY2O15391 372 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ICAM2P13598 275 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 HOXA9P31269 272 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 EFNA3P52797 238 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 HSD17B7P56937 341 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RRAS2P62070 204 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 MLLT11Q13015 90 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 GPR18Q14330 331 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 VASNQ6EMK4 673 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 C5orf46Q6UWT4 87 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 GTPBP8Q8N3Z3 284 aaPredicted RBP7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ZNF610Q8N9Z0 462 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 SIMC1Q8NDZ2 872 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ARL5BQ96KC2 179 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 OR51E2Q9H255 320 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 SLC6A20Q9NP91 592 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 ASF1BQ9NVP2 202 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 LRFN1Q9P244 771 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 RHBDD3Q9Y3P4 386 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 NUMBLQ9Y6R0 609 aa7.93□□□□□ -1.14
CTNND1-227ENST00000530748 TVP23AA6NH52 213 aa7.92□□□□□ -1.14
CTNND1-227ENST00000530748 GFRA2O00451 464 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms