RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 GPC6Q9Y625 555 aaPredicted RBP17.14■□□□□ 0.33
PKP3-204ENST00000526971 GMEB1Q9Y692 573 aa17.14■□□□□ 0.33
PKP3-204ENST00000526971 TRBV5-3A0A0A0MS03 114 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 RCBTB2O95199 551 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 ATE1O95260 518 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 TGM6O95932 706 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 UBTFL6P0CB48 400 aaPredicted RBP17.13■□□□□ 0.33
PKP3-204ENST00000526971 PRKCAP17252 672 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 RPS4Y1P22090 263 aaKnown RBP17.13■□□□□ 0.33
PKP3-204ENST00000526971 CTSSP25774 331 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 PEX19P40855 299 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 CCR4P51679 360 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 RPS3AP61247 264 aaKnown RBP17.13■□□□□ 0.33
PKP3-204ENST00000526971 SF3A3Q12874 501 aaKnown RBP eCLIP17.13■□□□□ 0.33
PKP3-204ENST00000526971 FADDQ13158 208 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 DAZAP2Q15038 168 aaPredicted RBP17.13■□□□□ 0.33
PKP3-204ENST00000526971 QPRTQ15274 297 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 SLC25A53Q5H9E4 307 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 GRAMD2AQ8IUY3 354 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 CMIPQ8IY22 773 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 TSPEARQ8WU66 669 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 MRGPRX4Q96LA9 322 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 ZFP3Q96NJ6 502 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 ZNF317Q96PQ6 595 aaPredicted RBP17.13■□□□□ 0.33
PKP3-204ENST00000526971 SMR3AQ99954 134 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 VAPAQ9P0L0 249 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 LEF1Q9UJU2 399 aaPredicted RBP17.13■□□□□ 0.33
PKP3-204ENST00000526971 NDUFAF1Q9Y375 327 aa17.13■□□□□ 0.33
PKP3-204ENST00000526971 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 TMEM247A6NEH6 219 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 SLC22A20A6NK97 555 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 CLDN24A6NM45 220 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 ETV2O00321 342 aaPredicted RBP17.12■□□□□ 0.33
PKP3-204ENST00000526971 ADAMDEC1O15204 470 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 EFNA2O43921 213 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 BCAS1O75363 584 aaPredicted RBP17.12■□□□□ 0.33
PKP3-204ENST00000526971 NTN1O95631 604 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 IL18BPO95998 194 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 BCHEP06276 602 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 DBIP07108 87 aaKnown RBP17.12■□□□□ 0.33
PKP3-204ENST00000526971 NUDT7P0C024 238 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 TMIGD3P0DMS9 266 aaPredicted RBP17.12■□□□□ 0.33
PKP3-204ENST00000526971 BMP2P12643 396 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 IL11P20809 199 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 PPIBP23284 216 aaKnown RBP17.12■□□□□ 0.33
PKP3-204ENST00000526971 ME2P23368 584 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 ELK4P28324 431 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 AGFG1P52594 562 aaKnown RBP17.12■□□□□ 0.33
PKP3-204ENST00000526971 CRISP3P54108 245 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 GNA13Q14344 377 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 DLEU7Q6UYE1 221 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 KRTAP1-3Q8IUG1 177 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 DPP10Q8N608 796 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 PINK1Q9BXM7 581 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 TMEM185BQ9H7F4 350 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 A4GALTQ9NPC4 353 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 EXOSC3Q9NQT5 275 aaKnown RBP17.12■□□□□ 0.33
PKP3-204ENST00000526971 MRGBPQ9NV56 204 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 KLHL14Q9P2G3 628 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 ZNF175Q9Y473 711 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 DSPPQ9NZW4 1301 aa17.12■□□□□ 0.33
PKP3-204ENST00000526971 A0A0G2JPF8 293 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 HNRNPCL2B2RXH8 293 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 HNRNPCL3B7ZW38 293 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 EIF1AYO14602 144 aaKnown RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 ANGPT2O15123 496 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 HNRNPCL1O60812 293 aaKnown RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 OPN1LWP04000 364 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 RAF1P04049 648 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 HNRNPCL4P0DMR1 293 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 FOSL1P15407 271 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 IL7RP16871 459 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 PGCP20142 388 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 OPRM1P35372 400 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 PLAURQ03405 335 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 FOXF2Q12947 444 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 CTU2Q2VPK5 515 aaKnown RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 DEFB113Q30KQ7 82 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 P4HA3Q7Z4N8 544 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 PEX5LQ8IYB4 626 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 LILRA2Q8N149 483 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 LINC01560Q8TB33 94 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 WDR60Q8WVS4 1066 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 ST8SIA1Q92185 356 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 FIG4Q92562 907 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 CNOT9Q92600 299 aaKnown RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 INTS12Q96CB8 462 aaKnown RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 TMEM19Q96HH6 336 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 ZNF845Q96IR2 970 aaPredicted RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 ADGRG7Q96K78 797 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 PLEKHF2Q9H8W4 249 aa17.11■□□□□ 0.33
PKP3-204ENST00000526971 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 NUP214P35658 2090 aaPredicted RBP17.11■□□□□ 0.33
PKP3-204ENST00000526971 ARID1AO14497 2285 aa17.1■□□□□ 0.33
PKP3-204ENST00000526971 A0A0J9YW62 118 aa17.1■□□□□ 0.33
PKP3-204ENST00000526971 A0A1W2PPR1 153 aa17.1■□□□□ 0.33
PKP3-204ENST00000526971 NID1P14543 1247 aa17.1■□□□□ 0.33
PKP3-204ENST00000526971 EIF1AXP47813 144 aaKnown RBP17.1■□□□□ 0.33
PKP3-204ENST00000526971 PON3Q15166 354 aa17.1■□□□□ 0.33
PKP3-204ENST00000526971 SGCBQ16585 318 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms