RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 NPIPA5E9PKD4 350 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 LINC01387J3KSC0 135 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 SUSD5O60279 629 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 HCN1O60741 890 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 IFNW1P05000 195 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 GP1BBP13224 206 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 HOXB6P17509 224 aaKnown RBP14.96□□□□□ -0.01
CAPN1-205ENST00000526954 CHMP24386 653 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 PSMA4P25789 261 aaKnown RBP14.96□□□□□ -0.01
CAPN1-205ENST00000526954 HTR2AP28223 471 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 HTR3AP46098 478 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 WIPI1Q5MNZ9 446 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-205ENST00000526954 TRILQ7L0X0 811 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 GRINAQ7Z429 371 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 NEIL3Q8TAT5 605 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 POC1BQ8TC44 478 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 GPR137Q96N19 417 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 MCHR1Q99705 422 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 SLX1AQ9BQ83 275 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 PIGQQ9BRB3 760 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 TMEM27Q9HBJ8 222 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 ASF1BQ9NVP2 202 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 NPIPA1Q9UND3 350 aa14.96□□□□□ -0.01
CAPN1-205ENST00000526954 TRGV5A0A0B4J1U4 118 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 SEMA7AO75326 666 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 WISP2O76076 250 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 GPIP06744 558 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 ELK4P28324 431 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 APOBEC1P41238 236 aaKnown RBP14.95□□□□□ -0.02
CAPN1-205ENST00000526954 TDGF1P3P51864 188 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 GFRA1P56159 465 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 FOXK1P85037 733 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 FOXF1Q12946 379 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 OR1Q1Q15612 314 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 IQCCQ4KMZ1 466 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 FAM98BQ52LJ0 330 aaKnown RBP14.95□□□□□ -0.02
CAPN1-205ENST00000526954 PRR30Q53SZ7 412 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-205ENST00000526954 NHSL2Q5HYW2 709 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 ENTPD8Q5MY95 495 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 ZNF613Q6PF04 617 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 PLEKHM3Q6ZWE6 761 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 TSEN54Q7Z6J9 526 aaKnown RBP14.95□□□□□ -0.02
CAPN1-205ENST00000526954 ADGRG5Q8IZF4 528 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 DNAJA4Q8WW22 397 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-205ENST00000526954 SLC47A1Q96FL8 570 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 NPAS1Q99742 590 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 PRR14Q9BWN1 585 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 TSPAN10Q9H1Z9 355 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-205ENST00000526954 SLC6A15Q9H2J7 730 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 C12orf10Q9HB07 376 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 IL1RAPQ9NPH3 570 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 RPH3AQ9Y2J0 694 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-205ENST00000526954 LIPGQ9Y5X9 500 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 ENPP4Q9Y6X5 453 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 V9GYQ6 96 aa14.95□□□□□ -0.02
CAPN1-205ENST00000526954 A0A0B4J2E0 115 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 A0A1B0GWA3 101 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 A0A1B0GX12 115 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 OR2M5A3KFT3 312 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 MAGEA2P43356 314 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 ACTR3P61158 418 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 VLDLRP98155 873 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 CHRNB3Q05901 458 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 SOWAHCQ53LP3 525 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-205ENST00000526954 SWT1Q5T5J6 900 aaKnown RBP14.94□□□□□ -0.02
CAPN1-205ENST00000526954 RAET1LQ5VY80 246 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 AAGABQ6PD74 315 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 ULK3Q6PHR2 472 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 DEF8Q6ZN54 512 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 PIWIL3Q7Z3Z3 882 aaKnown RBP14.94□□□□□ -0.02
CAPN1-205ENST00000526954 TSPYL5Q86VY4 417 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-205ENST00000526954 SPATA24Q86W54 205 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 CADM2Q8N3J6 435 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 CPT1CQ8TCG5 803 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 ADAMTS16Q8TE57 1224 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 CANT1Q8WVQ1 401 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 C3orf49Q96BT1 292 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 SFXN2Q96NB2 322 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 SEPHS2Q99611 448 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 LDAHQ9H6V9 325 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 NDUFAF4Q9P032 175 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 RPS6KB2Q9UBS0 482 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 ACAD8Q9UKU7 415 aa14.94□□□□□ -0.02
CAPN1-205ENST00000526954 PRRC2CQ9Y520 2896 aaKnown RBP14.93□□□□□ -0.02
CAPN1-205ENST00000526954 SHANK1Q9Y566 2161 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 DHRS12A0PJE2 317 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 TRAPPC13A5PLN9 417 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 SHISA8B8ZZ34 492 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 AQP7O14520 342 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 EFNA2O43921 213 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 OR5F1O95221 314 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 WISP1O95388 367 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 ACTL6AO96019 429 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 FABP3P05413 133 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 RAP2AP10114 183 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 ITGA2P17301 1181 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 RHCEP18577 417 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 TACR3P29371 465 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 GCKP35557 465 aa14.93□□□□□ -0.02
CAPN1-205ENST00000526954 POLR2HP52434 150 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms