RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
SKP1-208ENST00000521216 GPA33Q99795 319 aa3.51□□□□□ -1.85
SKP1-208ENST00000521216 SRXN1Q9BYN0 137 aa3.51□□□□□ -1.85
SKP1-208ENST00000521216 LIN28AQ9H9Z2 209 aaKnown RBP3.51□□□□□ -1.85
SKP1-208ENST00000521216 AIPL1Q9NZN9 384 aa3.51□□□□□ -1.85
SKP1-208ENST00000521216 ARHGAP23Q9P227 1491 aa3.51□□□□□ -1.85
SKP1-208ENST00000521216 SF3B1O75533 1304 aaKnown RBP eCLIP3.5□□□□□ -1.85
SKP1-208ENST00000521216 ZBED9Q6R2W3 1325 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 A8MUI8 341 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 HCN1O60741 890 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 UGT2B17O75795 530 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 BBOX1O75936 387 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 LRATO95237 230 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 GNA14O95837 355 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 KRT6BP04259 564 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 RNH1P13489 461 aaKnown RBP3.5□□□□□ -1.85
SKP1-208ENST00000521216 KRT13P13646 458 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 TBXA2RP21731 343 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 HPCAL1P37235 193 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 KRT6CP48668 564 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 TLE4Q04727 773 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 CKAP4Q07065 602 aaKnown RBP3.5□□□□□ -1.85
SKP1-208ENST00000521216 TMED1Q13445 227 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 TPD52L1Q16890 204 aaPredicted RBP3.5□□□□□ -1.85
SKP1-208ENST00000521216 RABGAP1LQ5R372 815 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 LRRC43Q8N309 656 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 STXBP6Q8NFX7 210 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 PAQR8Q8TEZ7 354 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 ELSPBP1Q96BH3 223 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 EBF4Q9BQW3 602 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 SPATA16Q9BXB7 569 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 MEAF6Q9HAF1 191 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 FARSBQ9NSD9 589 aaKnown RBP3.5□□□□□ -1.85
SKP1-208ENST00000521216 CGNQ9P2M7 1197 aaKnown RBP3.5□□□□□ -1.85
SKP1-208ENST00000521216 WARS2Q9UGM6 360 aaKnown RBP3.5□□□□□ -1.85
SKP1-208ENST00000521216 LCMT1Q9UIC8 334 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 LAMP5Q9UJQ1 280 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 ATP10DQ9P241 1426 aa3.5□□□□□ -1.85
SKP1-208ENST00000521216 FRMPD4Q14CM0 1322 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 WI2-2373I1.2A0A1W2PRP0 233 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 H0YHG0 523 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 PES1O00541 588 aaKnown RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 MSH4O15457 936 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 NEBLO76041 1014 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 SUPT7LO94864 414 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 SLITRK3O94933 977 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 IGHV3-48P01763 117 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 PGCP20142 388 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 TPSB2P20231 275 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 ATP6V1C1P21283 382 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 CD1BP29016 333 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 ACADVLP49748 655 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 ZNF133P52736 654 aaPredicted RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 CNTN2Q02246 1040 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 CHRNB3Q05901 458 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 CCDC173Q0VFZ6 552 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 IFT88Q13099 833 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 MXD4Q14582 209 aaPredicted RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 TPSAB1Q15661 275 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 CCDC14Q49A88 953 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 CCDC137Q6PK04 289 aaKnown RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 WDR74Q6RFH5 385 aaPredicted RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 TPRA1Q86W33 373 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 KIR3DL3Q8N743 410 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 ATP6V0D2Q8N8Y2 350 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 DCAF4L2Q8NA75 395 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 ZNF740Q8NDX6 193 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 OR52I1Q8NGK6 324 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 OR5L2Q8NGL0 311 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 RAPGEF5Q92565 580 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 SYAP1Q96A49 352 aaPredicted RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 TBC1D31Q96DN5 1066 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 TPPP3Q9BW30 176 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 NAT10Q9H0A0 1025 aaKnown RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 TMEM117Q9H0C3 514 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 MAGT1Q9H0U3 335 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 ZNF385DQ9H6B1 395 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 NANOGQ9H9S0 305 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 CHRNA9Q9UGM1 479 aa3.49□□□□□ -1.85
SKP1-208ENST00000521216 DDX49Q9Y6V7 483 aaKnown RBP3.49□□□□□ -1.85
SKP1-208ENST00000521216 IGHV2-70DA0A0C4DH43 119 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 E7ESA3 106 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 G3V4G9 280 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 ZSCAN12O43309 604 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 LALBAP00709 142 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 PCCBP05166 539 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 ALOX5P09917 674 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 CYP2B6P20813 491 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 NMT1P30419 496 aaKnown RBP3.48□□□□□ -1.85
SKP1-208ENST00000521216 CSNK1G2P78368 415 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 TRIM16LQ309B1 348 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 RIPPLY2Q5TAB7 128 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 UNQ9370/PRO34162Q6UXP9 181 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 VRK2Q86Y07 508 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 RNF175Q8N4F7 328 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 RAET1EQ8TD07 263 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 RNF138Q8WVD3 245 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 TCTEX1D2Q8WW35 142 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms