RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CTSCP53634 463 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR10A3P58181 314 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CDC42P60953 191 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RANP62826 216 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RBX1P62877 108 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 HSD11B2P80365 405 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZXDAP98168 799 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 HOXC5Q00444 222 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CRYZQ08257 329 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ST3GAL4Q11206 333 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2F1Q13607 317 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SERTAD2Q14140 314 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 GPR176Q14439 515 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RHEBQ15382 184 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 MED22Q15528 200 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TSTQ16762 297 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 GUK1Q16774 197 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CR1LQ2VPA4 569 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PCGF3Q3KNV8 242 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 MOGAT2Q3SYC2 334 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SCGB2B2Q4G0G5 96 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 MESTQ5EB52 335 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 EMC4Q5J8M3 183 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PYY3Q5JQD4 70 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CBWD3Q5JTY5 395 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 EOGTQ5NDL2 527 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CBWD5Q5RIA9 395 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TREML2Q5T2D2 321 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RNF219Q5W0B1 726 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CPZQ66K79 652 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PLAG1Q6DJT9 500 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR4F3Q6IEY1 312 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2T5Q6IEZ7 315 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ETFRF1Q6IPR1 90 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAHD2BQ6P2I3 314 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 DENND1BQ6P3S1 775 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 VWA1Q6PCB0 445 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ALKAL2Q6UX46 152 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 BTNL3Q6UXE8 466 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CASP12Q6UXS9 341 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 LINGO4Q6UY18 593 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 QSOX2Q6ZRP7 698 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 KCTD1Q719H9 257 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 LARP4Q71RC2 724 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ABI3BPQ7Z7G0 1075 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PARGQ86W56 976 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF573Q86YE8 665 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SYNPOQ8N3V7 929 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TOMM5Q8N4H5 51 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TTC9BQ8N6N2 239 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CCNYQ8ND76 341 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PROKR2Q8NFJ6 384 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR5M1Q8NGP8 315 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR9A4Q8NGU2 314 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2T29Q8NH02 315 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 BBS10Q8TAM1 723 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CD300LFQ8TDQ1 290 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR1E3Q8WZA6 343 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CNOT9Q92600 299 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAM162AQ96A26 154 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PYCR2Q96C36 320 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CERS2Q96G23 380 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAHD2AQ96GK7 314 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 MARS2Q96GW9 593 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PYURFQ96I23 114 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 BOD1Q96IK1 185 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF514Q96K75 400 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FCRL4Q96PJ5 515 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ACCSQ96QU6 501 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR4K3Q96R72 315 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC22A12Q96S37 553 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRRT1Q99946 306 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 THAP7Q9BT49 309 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FICDQ9BVA6 458 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TAPBPLQ9BX59 468 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 GABARAPL3Q9BY60 117 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 BARHL1Q9BZE3 327 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ACTR3CQ9C0K3 210 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 WWTR1Q9GZV5 400 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 WDCPQ9H6R7 721 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FBRSL1Q9HCM7 1045 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZDHHC4Q9NPG8 344 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 GPR173Q9NS66 373 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 MIOSQ9NXC5 875 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLCO1C1Q9NYB5 712 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC17A6Q9P2U8 582 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 NDOR1Q9UHB4 597 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CNTN6Q9UQ52 1028 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PLEKHM1Q9Y4G2 1056 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 GPR45Q9Y5Y3 372 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 COL1A1P02452 1464 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 DIP2CQ9Y2E4 1556 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TOPAZ1Q8N9V7 1692 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 DENND4AQ7Z401 1863 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 UBR1Q8IWV7 1749 aa4.46□□□□□ -1.69
HMGB1P19-201ENST00000517578 YLPM1P49750 1951 aaKnown RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 TP53BP1Q12888 1972 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P19-201ENST00000517578 A0A087WUJ7 227 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms