RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ACVR1BP36896 505 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 IL18R1Q13478 541 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 ZKSCAN8Q15776 578 aaPredicted RBP3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 SGCBQ16585 318 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 GLRA4Q5JXX5 417 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 TMEM184AQ6ZMB5 413 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 MCOLN2Q8IZK6 566 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 DLX4Q92988 240 aaPredicted RBP3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 TSSK1BQ9BXA7 367 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 FUT8Q9BYC5 575 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 MRPL9Q9BYD2 267 aaKnown RBP3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 NLNQ9BYT8 704 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 SLC38A10Q9HBR0 1119 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 HPS4Q9NQG7 708 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 DUSP12Q9UNI6 340 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 STX8Q9UNK0 236 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 ZNF175Q9Y473 711 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 OTOGQ6ZRI0 2925 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 NAV3Q8IVL0 2385 aa3.29□□□□□ -1.88
TOPBP1-206ENST00000508524 DOPEY2Q9Y3R5 2298 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 F5P12259 2224 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 A0A0J9YVX5 310 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 HAS3O00219 553 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 PDXKO00764 312 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 ZNF263O14978 683 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 NDUFB10O96000 172 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 HIST1H2AGP0C0S8 130 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 TDGF1P13385 188 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 FERP16591 822 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 FUT3P21217 361 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 COPB2P35606 906 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 NPY2RP49146 381 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 RAG2P55895 527 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 NME5P56597 212 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 CSTF1Q05048 431 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 PUDPQ08623 228 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 SRSF5Q13243 272 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 BTG3Q14201 252 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 RCN2Q14257 317 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 SF3A2Q15428 464 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 ZNF528Q3MIS6 628 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 HIST2H2AA3Q6FI13 130 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 TMEM270Q6UE05 265 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 TMEM179Q6ZVK1 233 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 RANBP3LQ86VV4 465 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 MKXQ8IYA7 352 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 HIST1H2ACQ93077 130 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 JAKMIP1Q96N16 626 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 RIOK1Q9BRS2 568 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 Q9H3A6 140 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 ALG9Q9H6U8 611 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 CYP39A1Q9NYL5 469 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 ZNF221Q9UK13 617 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 FBXW2Q9UKT8 454 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 NEU3Q9UQ49 428 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 ENTPD4Q9Y227 616 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 ZFHX3Q15911 3703 aa3.28□□□□□ -1.88
TOPBP1-206ENST00000508524 PDZD2O15018 2839 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 TRBV7-9A0A0J9YWB2 115 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 WWP2O00308 870 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 CFLARO15519 480 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 PRKAB2O43741 272 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 UGT1A3P35503 534 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 SGSHP51688 502 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 BNIP1Q12981 228 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 SLMAPQ14BN4 828 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 HERPUD1Q15011 391 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 NKAIN3Q8N8D7 197 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 SDR42E1Q8WUS8 393 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 DHTKD1Q96HY7 919 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 IL1RAPL2Q9NP60 686 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 MEPEQ9NQ76 525 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 PIGVQ9NUD9 493 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 CELSR2Q9HCU4 2923 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 DOCK8Q8NF50 2099 aa3.27□□□□□ -1.89
TOPBP1-206ENST00000508524 CSMD1Q96PZ7 3565 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 ADGRG4Q8IZF6 3080 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 TLN1Q9Y490 2541 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 LRIT2A6NDA9 550 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 TRIM49D1C9J1S8 452 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 F5H6K3 240 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 OR7A17O14581 309 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 SDC3O75056 442 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 IGSF6O95976 241 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 CHRNA1P02708 482 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 APRTP07741 180 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 HOXB8P17481 243 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 PTBP1P26599 531 aaKnown RBP eCLIP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 NSFP46459 744 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 SLC26A2P50443 739 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 NLRP11P59045 1033 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 KLRC3Q07444 240 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 EIF2B1Q14232 305 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 CAMK4Q16566 473 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 ZCCHC12Q6PEW1 402 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 LINC01555Q8NAE3 123 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 LPCAT1Q8NF37 534 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 TMEM37Q8WXS4 190 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms