RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ISCA2Q86U28 154 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 FBXO16Q8IX29 292 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 FAM71AQ8IYT1 594 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 C8orf31Q8N9H6 132 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 NEIL2Q969S2 332 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 PCED1BQ96HM7 432 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 SLC30A2Q9BRI3 323 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ALG8Q9BVK2 526 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 NXF5Q9H1B4 397 aaKnown RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 CAB39LQ9H9S4 337 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ASCL3Q9NQ33 180 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ZNF701Q9NV72 531 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 UVRAGQ9P2Y5 699 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 RNF6Q9Y252 685 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 FRMPD4Q14CM0 1322 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 FANCIQ9NVI1 1328 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 TRBV7-9A0A0J9YWB2 115 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ATP6AP2A0A1C7CYW4 349 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ZNF503-AS2A6NEH8 195 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ZNF487B1APH4 448 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 CCRL2O00421 344 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 AIM2O14862 343 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 DENRO43583 198 aaKnown RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 SCO2O43819 266 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 NDUFS7O75251 213 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 CD160O95971 181 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 PLAUP00749 431 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 TCRBP04435 133 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 XKP51811 444 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 TMEM50BP56557 158 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 MRPS25P82663 173 aaKnown RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 TLE4Q04727 773 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 SCRN3Q0VDG4 424 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 NKAPLQ5M9Q1 402 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 DENND2CQ68D51 928 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 HIST2H2AA3Q6FI13 130 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 PEG10Q86TG7 708 aaKnown RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 COMMD2Q86X83 199 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 CRLF3Q8IUI8 442 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 OR5T2Q8NGG2 359 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 CD99L2Q8TCZ2 262 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 BADQ92934 168 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 NEDD4LQ96PU5 975 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ERGIC2Q96RQ1 377 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ATP5SQ99766 215 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 RSG1Q9BU20 258 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 ACKR4Q9NPB9 350 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 PLEKHJ1Q9NW61 149 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 IKZF2Q9UKS7 526 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 PRG3Q9Y2Y8 225 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-204ENST00000504430 CSNK1G3Q9Y6M4 447 aa4.65□□□□□ -1.67
NIPBL-204ENST00000504430 F5H5T6 163 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 STK17BO94768 372 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 LDOC1O95751 146 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-204ENST00000504430 TMEM50AO95807 157 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 HMGN1P05114 100 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 ARSBP15848 533 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 GIFP27352 417 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 EFNB2P52799 333 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 TAS2R38P59533 333 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 PITX1P78337 314 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-204ENST00000504430 STX4Q12846 297 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 RPEL1Q2QD12 228 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 COX19Q49B96 90 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 TMEM35AQ53FP2 167 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 PAPD7Q5XG87 772 aaKnown RBP4.64□□□□□ -1.67
NIPBL-204ENST00000504430 FAM92BQ6ZTR7 304 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 SHFQ7M4L6 423 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 GPBP1Q86WP2 473 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 TMEM25Q86YD3 366 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 PGAM4Q8N0Y7 254 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 GPC2Q8N158 579 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 CATSPER1Q8NEC5 780 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 OR4F6Q8NGB9 312 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 OR13C5Q8NGS8 318 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 LYPD6BQ8NI32 183 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 PPP4R1Q8TF05 950 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 DACT3Q96B18 629 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-204ENST00000504430 FAF2Q96CS3 445 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 WDR34Q96EX3 536 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 HOPXQ9BPY8 73 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-204ENST00000504430 NUDT9Q9BW91 350 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 NMRAL1Q9HBL8 299 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 ISYNA1Q9NPH2 558 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 IFT46Q9NQC8 304 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 BATF3Q9NR55 127 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 GKN1Q9NS71 199 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 ASB6Q9NWX5 421 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 GINS2Q9Y248 185 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 SHISA7A6NL88 538 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 OR7A17O14581 309 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 PPP1R2P9O14990 202 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 UTS2O95399 124 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 RGS6P49758 472 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 CEBPGP53567 150 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 SLC17A1Q14916 467 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 SPESP1Q6UW49 350 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 LCLAT1Q6UWP7 414 aa4.64□□□□□ -1.67
NIPBL-204ENST00000504430 C9orf139Q6ZV77 190 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms