RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 DUSP7Q16829 419 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 CYBRD1Q53TN4 286 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 CMPK2Q5EBM0 449 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 WIPI1Q5MNZ9 446 aaPredicted RBP9.09□□□□□ -0.95
NUP54-203ENST00000504173 RAET1LQ5VY80 246 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 ZNF324BQ6AW86 544 aaPredicted RBP9.09□□□□□ -0.95
NUP54-203ENST00000504173 ARSKQ6UWY0 536 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 ZNF550Q7Z398 422 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 GRAMD2AQ8IUY3 354 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 ZNF563Q8TA94 476 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 LZICQ8WZA0 190 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 PROX1Q92786 737 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 MCUR1Q96AQ8 359 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 CCDC124Q96CT7 223 aaKnown RBP9.09□□□□□ -0.95
NUP54-203ENST00000504173 ARSGQ96EG1 525 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 CLPTM1LQ96KA5 538 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 SLX1AQ9BQ83 275 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 SLC6A15Q9H2J7 730 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 ACKR4Q9NPB9 350 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 MED17Q9NVC6 651 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 ADPRHL2Q9NX46 363 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 TAS2R10Q9NYW0 307 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 BAG5Q9UL15 447 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 VDAC3Q9Y277 283 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 RPH3AQ9Y2J0 694 aaPredicted RBP9.09□□□□□ -0.95
NUP54-203ENST00000504173 CHST2Q9Y4C5 530 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 LIPGQ9Y5X9 500 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 JMJD1CQ15652 2540 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 NSD1Q96L73 2696 aaPredicted RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 MAP1AP78559 2803 aaPredicted RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 NCKAP5O14513 1909 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 ACANP16112 2415 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 FAM221AA4D161 298 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 SYT5O00445 386 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 AP3D1O14617 1153 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 ARPC2O15144 300 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 FRS3O43559 492 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 STAMBPO95630 424 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 ZNF682O95780 498 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 EPPINO95925 133 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 LGI1O95970 557 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 SERPINA1P01009 418 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 IGHG3P01860 377 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 FESP07332 822 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 LINGO3P0C6S8 592 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 EDN3P14138 238 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 CD247P20963 164 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 TDGF1P3P51864 188 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 RGS8P57771 180 aaPredicted RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 EPS8Q12929 822 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 ELOAQ14241 798 aaKnown RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 QPRTQ15274 297 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 TOMM34Q15785 309 aaPredicted RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 FXNQ16595 210 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 PLPPR5Q32ZL2 321 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 GLIPR1L2Q4G1C9 344 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 KRTCAP3Q53RY4 240 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 GFRALQ6UXV0 394 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 TRILQ7L0X0 811 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 COMTD1Q86VU5 262 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 SPPL2CQ8IUH8 684 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 GHDCQ8N2G8 530 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 GPR32P1Q8NGA4 272 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 GPR119Q8TDV5 335 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 TMEM234Q8WY98 164 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 SLC35B4Q969S0 331 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 ZBTB8AQ96BR9 441 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 TPD52L3Q96J77 140 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 NSMCE2Q96MF7 247 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 RNF145Q96MT1 663 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 SFXN2Q96NB2 322 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 BARD1Q99728 777 aaKnown RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 MDFIQ99750 246 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 KLHDC3Q9BQ90 382 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 RSPO3Q9BXY4 272 aaPredicted RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 CADM1Q9BY67 442 aaKnown RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 PCDHAC1Q9H158 963 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 LRMDAQ9H2I8 198 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 MUC13Q9H3R2 512 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 SLC9A8Q9Y2E8 581 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 SLC6A5Q9Y345 797 aa9.08□□□□□ -0.96
NUP54-203ENST00000504173 MRPS18CQ9Y3D5 142 aaKnown RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 KLF2Q9Y5W3 355 aaPredicted RBP9.08□□□□□ -0.96
NUP54-203ENST00000504173 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 SHISA8B8ZZ34 492 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 M0R3H8 397 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 GSC2O15499 205 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 ZIC3O60481 467 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 HCN1O60741 890 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 ADAM11O75078 769 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 WISP2O76076 250 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 PRG2P13727 222 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 CD99P14209 185 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 ZNF17P17021 662 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 ACAA2P42765 397 aaKnown RBP9.07□□□□□ -0.96
NUP54-203ENST00000504173 IDH2P48735 452 aaKnown RBP9.07□□□□□ -0.96
NUP54-203ENST00000504173 SESN3P58005 492 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 COPZ1P61923 177 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 SELENOWP63302 87 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 HOXC5Q00444 222 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms