RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ZNF780B	Q9Y6R6	833 aa		4.62	□□□□□ -1.67
SEC13-219	ENST00000492602	IGHV3OR16-10	A0A075B7F0	116 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	IGHV3-15	A0A0B4J1V0	119 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	VSTM5	A8MXK1	200 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	FOXE1	O00358	373 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	T	O15178	435 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	TP73	O15350	636 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	PHGDH	O43175	533 aa	Known RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	XPNPEP2	O43895	674 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	TSPAN2	O60636	221 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	DEAF1	O75398	565 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	BCAS2	O75934	225 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	ESRRB	O95718	433 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	HPX	P02790	462 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	IGFBP1	P08833	259 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	NR2F6	P10588	404 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	TCN1	P20061	433 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	S1PR1	P21453	382 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	ENPP1	P22413	925 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	ME2	P23368	584 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	IVD	P26440	423 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SFTPD	P35247	375 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	PPIC	P45877	212 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	RFX3	P48380	749 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	CLK3	P49761	638 aa	Known RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SERPINB8	P50452	374 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SERPINB9	P50453	376 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	CCNG1	P51959	295 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	PNLIPRP2	P54317	469 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	LCN2	P80188	198 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC25A3	Q00325	362 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	MVK	Q03426	396 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	DBP	Q10586	325 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	DDX39B	Q13838	428 aa	Known RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	GABRA6	Q16445	453 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	PFKFB4	Q16877	469 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	TMEM44	Q2T9K0	475 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC9B1	Q4ZJI4	515 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	CCNYL2	Q5T2Q4	361 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	AVPI1	Q5T686	147 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	MROH9	Q5TGP6	573 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	KHDRBS2	Q5VWX1	349 aa	Known RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	FBXW9	Q5XUX1	488 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	OR7E24	Q6IFN5	339 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	RETREG3	Q86VR2	466 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	CDYL2	Q8N8U2	506 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	WDR31	Q8NA23	367 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC16A11	Q8NCK7	471 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SPATA4	Q8NEY3	305 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	OR4K14	Q8NGD5	310 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	OR52R1	Q8NGF1	315 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	RHEBL1	Q8TAI7	183 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	RNF138	Q8WVD3	245 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	RDH5	Q92781	318 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	ITPKC	Q96DU7	683 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	KTI12	Q96EK9	354 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SLC47A1	Q96FL8	570 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	KLHL15	Q96M94	604 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	MUS81	Q96NY9	551 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	GPR22	Q99680	433 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	RBBP8	Q99708	897 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	NPAS1	Q99742	590 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	PSD2	Q9BQI7	771 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	MS4A8	Q9BY19	250 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	RTN4R	Q9BZR6	473 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	DPH5	Q9H2P9	285 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	ELOVL6	Q9H5J4	265 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	IPPK	Q9H8X2	491 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	BCO1	Q9HAY6	547 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	PALMD	Q9NP74	551 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	GIMAP4	Q9NUV9	329 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	OXSM	Q9NWU1	459 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	KLHL9	Q9P2J3	617 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	MRTO4	Q9UKD2	239 aa	Known RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	SNX6	Q9UNH7	406 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	STK38L	Q9Y2H1	464 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	AUP1	Q9Y679	476 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	KIAA1109	Q2LD37	5005 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602	DNAH7	Q8WXX0	4024 aa		4.61	□□□□□ -1.67
SEC13-219	ENST00000492602		A0A1W2PR48	441 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	TCRBV9S1A1T	A0A576	114 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	TMEM129	A0AVI4	362 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CXorf49	A8MYA2	514 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SRRM5	B3KS81	715 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602		E7ESA3	106 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602		H0YL77	283 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	PIP5K1B	O14986	540 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	PGRMC2	O15173	223 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	RGS14	O43566	566 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	NME6	O75414	186 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CRCP	O75575	148 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	KLHL2	O95198	593 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	WISP3	O95389	354 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	OTC	P00480	354 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	CRYAA	P02489	173 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	KRT6A	P02538	564 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	KRT6B	P04259	564 aa		4.6	□□□□□ -1.67
SEC13-219	ENST00000492602	SFTPB	P07988	381 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms