RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MTTPP55157 894 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 LINC00315P59091 139 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 KRTAP10-1P60331 282 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 GPNMBQ14956 572 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 NRMQ8IXM6 262 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 FAM71E2Q8N5Q1 922 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 MARCH1Q8TCQ1 289 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 CCDC47Q96A33 483 aaKnown RBP3.11□□□□□ -1.91
CCDC39-206ENST00000489868 PGLYRP4Q96LB8 373 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 KRT23Q9C075 422 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 CARMIL1Q5VZK9 1371 aa3.11□□□□□ -1.91
CCDC39-206ENST00000489868 KRTAP4-16G5E9R7 235 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-206ENST00000489868 CTAGE5O15320 804 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 SNAI2O43623 268 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 SNAPINO95295 136 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 LALBAP00709 142 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 RNH1P13489 461 aaKnown RBP3.1□□□□□ -1.91
CCDC39-206ENST00000489868 DLSTP36957 453 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 LHX2P50458 406 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 NSDHLQ15738 373 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 SYPL1Q16563 259 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 UNC5DQ6UXZ4 953 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 OR56B4Q8NH76 319 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 BLOC1S5Q8TDH9 187 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 DNAJA4Q8WW22 397 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-206ENST00000489868 FAM151AQ8WW52 585 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 SLC6A7Q99884 636 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 FICDQ9BVA6 458 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 PATZ1Q9HBE1 687 aaKnown RBP3.1□□□□□ -1.91
CCDC39-206ENST00000489868 BTNL2Q9UIR0 455 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 TP53TG5Q9Y2B4 290 aa3.1□□□□□ -1.91
CCDC39-206ENST00000489868 MTCL1Q9Y4B5 1905 aaKnown RBP3.09□□□□□ -1.91
CCDC39-206ENST00000489868 A6NDX4 124 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 PRKYO43930 277 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 PRPSAP2O60256 369 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 FAM189A1O60320 539 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 ECI2O75521 394 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 CCNCP24863 283 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 CYP2F1P24903 491 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 CCND2P30279 289 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 KIF5BP33176 963 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 PRKXP51817 358 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 BIDP55957 195 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 PRPS1P60891 318 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 GMFBP60983 142 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 IL1RL1Q01638 556 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 CCDC173Q0VFZ6 552 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 TOR1AIP1Q5JTV8 583 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 CASC10Q5T4H9 136 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 ZNF691Q5VV52 312 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 ACP7Q6ZNF0 438 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 C16orf62Q7Z3J2 963 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 ZNF786Q8N393 782 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 SVOPLQ8N434 492 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 KIR3DL3Q8N743 410 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 ARL10Q8N8L6 244 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 Q8N9W7 124 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 POLR2J2Q9GZM3 115 aaKnown RBP3.09□□□□□ -1.91
CCDC39-206ENST00000489868 POLR2J3Q9H1A7 115 aaKnown RBP3.09□□□□□ -1.91
CCDC39-206ENST00000489868 C1orf21Q9H246 121 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 AIG1Q9NVV5 245 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 KIF25Q9UIL4 384 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 ZNF223Q9UK11 482 aaPredicted RBP3.09□□□□□ -1.91
CCDC39-206ENST00000489868 GSTK1Q9Y2Q3 226 aa3.09□□□□□ -1.91
CCDC39-206ENST00000489868 GPRASP1Q5JY77 1395 aa3.09□□□□□ -1.92
CCDC39-206ENST00000489868 PPIAL4CA0A0B4J2A2 164 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 IGHV2-70DA0A0C4DH43 119 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 GJE1A6NN92 205 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 HCRTR1O43613 425 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 NEBLO76041 1014 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 MMP1P03956 469 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 RBMY1CP0DJD4 496 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 PPIAL4GP0DN37 164 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 TBXA2RP21731 343 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 COX7A1P24310 79 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 CHRNB3Q05901 458 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 PARP10Q53GL7 1025 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 LRRC8BQ6P9F7 803 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 ACOT7LQ6ZUV0 252 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 NKAPP1Q8N9T2 125 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 DENND6BQ8NEG7 585 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 OR8H1Q8NGG4 311 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 PNPT1Q8TCS8 783 aaKnown RBP3.08□□□□□ -1.92
CCDC39-206ENST00000489868 RAB7BQ96AH8 199 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 RNF185Q96GF1 192 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 GAL3ST1Q99999 423 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 MEAF6Q9HAF1 191 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 MTRF1LQ9UGC7 380 aaKnown RBP3.08□□□□□ -1.92
CCDC39-206ENST00000489868 ERVW-1Q9UQF0 538 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 FRMPD4Q14CM0 1322 aa3.08□□□□□ -1.92
CCDC39-206ENST00000489868 MYO10Q9HD67 2058 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 DFNA5O60443 496 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 SCGB2A1O75556 95 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 KLF8O95600 359 aaPredicted RBP3.07□□□□□ -1.92
CCDC39-206ENST00000489868 MOSP00540 346 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 PCCAP05165 728 aaPredicted RBP3.07□□□□□ -1.92
CCDC39-206ENST00000489868 ALOX5P09917 674 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 PGCP20142 388 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 CALB2P22676 271 aa3.07□□□□□ -1.92
CCDC39-206ENST00000489868 HTR1FP30939 366 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms