RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 A0A1W2PQM1 296 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 UTS2O95399 124 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 LIMS3P0CW19 117 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 LIMS4P0CW20 117 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 CPEP16870 476 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 PSMA1P25786 263 aaKnown RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SOX3P41225 446 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 CCL7P80098 99 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 FOXK2Q01167 660 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 TMED1Q13445 227 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 FHL1Q13642 323 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 NDUFAF6Q330K2 333 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SOWAHCQ53LP3 525 aaPredicted RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 OAFQ86UD1 273 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 PHC2Q8IXK0 858 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 OR1N1Q8NGS0 311 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 IFT27Q9BW83 186 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SLC19A3Q9BZV2 496 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SIAEQ9HAT2 523 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SLC22A11Q9NSA0 550 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 MKL2Q9ULH7 1088 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 UNC13CQ8NB66 2214 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SCDO00767 359 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 PRKNO60260 465 aaPredicted RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 PPM1BO75688 479 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 IGHA1P01876 353 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 HPGDP15428 266 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 CRYBB2P43320 205 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 CSTF1Q05048 431 aaKnown RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SIGLEC14Q08ET2 396 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 TPBGQ13641 420 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 EBPQ15125 230 aaKnown RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 ANKDD1AQ495B1 522 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 ARMC4Q5T2S8 1044 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 C16orf87Q6PH81 154 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 COX15Q7KZN9 410 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 MEPCEQ7L2J0 689 aaKnown RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 LAPTM4BQ86VI4 370 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 MAML2Q8IZL2 1156 aaPredicted RBP13.37□□□□□ -0.27
NINJ1-204ENST00000489274 ZNF485Q8NCK3 441 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 PSD4Q8NDX1 1056 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 BBS1Q8NFJ9 593 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 OR51A7Q8NH64 312 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 FNDC8Q8TC99 324 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 NAT6Q93015 286 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 C3orf49Q96BT1 292 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 SGTBQ96EQ0 304 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 TNFRSF13CQ96RJ3 184 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 LRRN3Q9H3W5 708 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 STUB1Q9UNE7 303 aa13.37□□□□□ -0.27
NINJ1-204ENST00000489274 TRAV27A0A087WT01 109 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 J3QRE1 110 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 IGF2P01344 180 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 UBL4AP11441 157 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 CALRP27797 417 aaKnown RBP13.36□□□□□ -0.27
NINJ1-204ENST00000489274 SLC6A6P31641 620 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 SLC9A3P48764 834 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 SKP2Q13309 424 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 CD226Q15762 336 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 ZNF362Q5T0B9 420 aaPredicted RBP13.36□□□□□ -0.27
NINJ1-204ENST00000489274 HLA-DQA1Q5Y7H0 255 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 WBP2NLQ6ICG8 309 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 NIPAL3Q6P499 406 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 PLBD1Q6P4A8 553 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 C9orf40Q8IXQ3 194 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 MFSD4AQ8N468 514 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 ZC3H10Q96K80 434 aaKnown RBP13.36□□□□□ -0.27
NINJ1-204ENST00000489274 ZNF649Q9BS31 505 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 CDADC1Q9BWV3 514 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 GAREM1Q9H706 876 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 MCCC2Q9HCC0 563 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 COPS7AQ9UBW8 275 aa13.36□□□□□ -0.27
NINJ1-204ENST00000489274 IGHV5-10-1A0A0J9YXX1 117 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 J3QRK9 145 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 SOCS6O14544 535 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 APOL3O95236 402 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 ONECUT2O95948 504 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 PNMTP11086 282 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 PEPDP12955 493 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 HOXD12P35452 270 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 IDUAP35475 653 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 SLC1A3P43003 542 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
NINJ1-204ENST00000489274 APOOLQ6UXV4 268 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 TMCO5AQ8N6Q1 288 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 C17orf47Q8NEP4 570 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 OR4F15Q8NGB8 312 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 PTP4A1Q93096 173 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 HSPBAP1Q96EW2 488 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 ARHGAP9Q9BRR9 750 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 SLC7A5P2Q9GIP4 190 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 CTSFQ9UBX1 484 aa13.35□□□□□ -0.27
NINJ1-204ENST00000489274 TNRC6BQ9UPQ9 1833 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms