RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 GPR32P1Q8NGA4 272 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 OR5M3Q8NGP4 307 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 RORBQ92753 470 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 RAB8BQ92930 207 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 EFHD2Q96C19 240 aaPredicted RBP17.72■□□□□ 0.43
CCM2-216ENST00000488727 DHRS1Q96LJ7 313 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 DGCR6LQ9BY27 220 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 MFRPQ9BY79 579 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 RLIMQ9NVW2 624 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 P2RX2Q9UBL9 471 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 SH3GLB1Q9Y371 365 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 TMEM247A6NEH6 219 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 CDK2AP1O14519 115 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 TSPAN2O60636 221 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 MT-ND2P03891 347 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 OR12D1P0DN82 309 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 SFTPCP11686 197 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 MASP1P48740 699 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 PSPHP78330 225 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 RPS26P11Q5JNZ5 115 aaPredicted RBP17.71■□□□□ 0.43
CCM2-216ENST00000488727 SYT6Q5T7P8 510 aaPredicted RBP17.71■□□□□ 0.43
CCM2-216ENST00000488727 AP1ARQ63HQ0 302 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 GPALPP1Q8IXQ4 340 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 DEPDC4Q8N2C3 294 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 ZNF540Q8NDQ6 660 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 OR10G3Q8NGC4 313 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 TBC1D15Q8TC07 691 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 ZNF607Q96SK3 696 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 NIPSNAP1Q9BPW8 284 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 HES7Q9BYE0 225 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.71■□□□□ 0.431e-8■■■■□ 21.4
CCM2-216ENST00000488727 ZNF556Q9HAH1 456 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 FBXO34Q9NWN3 711 aa17.71■□□□□ 0.43
CCM2-216ENST00000488727 ATXN7O15265 892 aaPredicted RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 REM1O75628 298 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 KCNK2O95069 426 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 GABARAPO95166 117 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 NAGAP17050 411 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 KCNJ5P48544 419 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 TMED10P49755 219 aaKnown RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 KHKP50053 298 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 POU6F2P78424 691 aaPredicted RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 SMN1Q16637 294 aaKnown RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 CCNJQ5T5M9 372 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 FIGNL1Q6PIW4 674 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 Q6ZS92 163 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 OR52J3Q8NH60 311 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 PROX1Q92786 737 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 DIO2Q92813 273 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 ADOQ96SZ5 270 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 BTBD2Q9BX70 525 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 PLGRKTQ9HBL7 147 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 SH2D2AQ9NP31 389 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 RYDENQ9NUL5 291 aaKnown RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 AASSQ9UDR5 926 aa17.7■□□□□ 0.42
CCM2-216ENST00000488727 WARS2Q9UGM6 360 aaKnown RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 GPC6Q9Y625 555 aaPredicted RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 CHCHD2Q9Y6H1 151 aaPredicted RBP17.7■□□□□ 0.42
CCM2-216ENST00000488727 A0A1B0GVG6 124 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 PRAMEF27A3QJZ7 478 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 DUXAA6NLW8 204 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 ASNA1O43681 348 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 SLC25A12O75746 678 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 CCL3P10147 92 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 RFX3P48380 749 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 ANXA11P50995 505 aaKnown RBP17.69■□□□□ 0.42
CCM2-216ENST00000488727 FUT5Q11128 374 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 DECR1Q16698 335 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 COLEC12Q5KU26 742 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 RTL4Q6ZR62 310 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 ZAR1Q86SH2 424 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 CROCCP3Q8IVE0 287 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 DND1Q8IYX4 353 aaKnown RBP17.69■□□□□ 0.42
CCM2-216ENST00000488727 OR9Q2Q8NGE9 314 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 RHOXF1Q8NHV9 184 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 PHF10Q8WUB8 498 aaKnown RBP17.69■□□□□ 0.42
CCM2-216ENST00000488727 XAGE5Q8WWM1 108 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 HGDQ93099 445 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 YIPF6Q96EC8 236 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 BBC3Q96PG8 261 aaPredicted RBP17.69■□□□□ 0.42
CCM2-216ENST00000488727 FKBP14Q9NWM8 211 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 SPENQ96T58 3664 aaKnown RBP17.69■□□□□ 0.42
CCM2-216ENST00000488727 OR6C70A6NIJ9 312 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 IL33O95760 270 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 BCL10O95999 233 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 GABRB1P18505 474 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 IL12BP29460 328 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 PNLIPRP2P54317 469 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 DCST2Q5T1A1 773 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 SLC6A19Q695T7 634 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 ZNF770Q6IQ21 691 aaPredicted RBP17.69■□□□□ 0.42
CCM2-216ENST00000488727 HEPHL1Q6MZM0 1159 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 P3H2Q8IVL5 708 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 PSD4Q8NDX1 1056 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 BBS10Q8TAM1 723 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 FAM81AQ8TBF8 368 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 PAQR8Q8TEZ7 354 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 SGCZQ96LD1 299 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 COL21A1Q96P44 957 aa17.69■□□□□ 0.42
CCM2-216ENST00000488727 ALPK1Q96QP1 1244 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms