RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 MCF2LO15068 1137 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 RAD51CO43502 376 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 DCXO43602 365 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 PALMO75781 387 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 FLOT1O75955 427 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 PLEKP08567 350 aaPredicted RBP3.85□□□□□ -1.79
SRRM1-215ENST00000488317 GPR89BP0CG08 455 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 DRD5P21918 477 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 LMO2P25791 158 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 GNA11P29992 359 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 ERVK11-1P61568 191 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 MS4A2Q01362 244 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 IFT88Q13099 833 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 RAB35Q15286 201 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 UBE2V2Q15819 145 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 CDKN3Q16667 212 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 ZCWPW2Q504Y3 356 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 FAM219BQ5XKK7 198 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 LEG1Q6P5S2 330 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 BTNL3Q6UXE8 466 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 PRSS33Q8NF86 280 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 OR2T34Q8NGX1 318 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 CCDC26Q8TAB7 109 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 TAF15Q92804 592 aaKnown RBP eCLIP3.85□□□□□ -1.79
SRRM1-215ENST00000488317 CHMP6Q96FZ7 201 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 CCDC28BQ9BUN5 200 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 TMEM109Q9BVC6 243 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 NFKBIZQ9BYH8 718 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 TRIM6Q9C030 488 aaPredicted RBP3.85□□□□□ -1.79
SRRM1-215ENST00000488317 DHX33Q9H6R0 707 aaKnown RBP3.85□□□□□ -1.79
SRRM1-215ENST00000488317 C6orf50Q9HD87 102 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 CTSZQ9UBR2 303 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 CHRNA9Q9UGM1 479 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 TBK1Q9UHD2 729 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 SPATA2Q9UM82 520 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 TFR2Q9UP52 801 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 RNF115Q9Y4L5 304 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 SF3B1O75533 1304 aaKnown RBP eCLIP3.85□□□□□ -1.79
SRRM1-215ENST00000488317 PLIN4Q96Q06 1357 aa3.85□□□□□ -1.79
SRRM1-215ENST00000488317 COL4A1P02462 1669 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 CCT8L1PA6NM43 557 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 CCDC169A6NNP5 214 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.84□□□□□ -1.79
SRRM1-215ENST00000488317 TOXO94900 526 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ATP6V1G2O95670 118 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 AGTP01019 485 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 CLUP10909 449 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 RPA2P15927 270 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 KLK7P49862 253 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ELF3P78545 371 aaPredicted RBP3.84□□□□□ -1.79
SRRM1-215ENST00000488317 UAP1Q16222 522 aaPredicted RBP3.84□□□□□ -1.79
SRRM1-215ENST00000488317 PDK4Q16654 411 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 KRT71Q3SY84 523 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 CAVIN4Q5BKX8 364 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 C9orf66Q5T8R8 295 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ATAD3BQ5T9A4 648 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 KCTD16Q68DU8 428 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 FAAP20Q6NZ36 180 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 SCYL2Q6P3W7 929 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 HACD2Q6Y1H2 254 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ZNF841Q6ZN19 808 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 PRSS48Q7RTY5 328 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ZDHHC21Q8IVQ6 265 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 MYOCDQ8IZQ8 938 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ARL14Q8N4G2 192 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ZNF491Q8N8L2 437 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 SDR42E1Q8WUS8 393 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 IFT81Q8WYA0 676 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 UPRTQ96BW1 309 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 DNAJA3Q96EY1 480 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 AKR1E2Q96JD6 320 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 C4orf36Q96KX1 117 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 IFT74Q96LB3 600 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 ZNF317Q96PQ6 595 aaPredicted RBP3.84□□□□□ -1.79
SRRM1-215ENST00000488317 XPO6Q96QU8 1125 aaKnown RBP3.84□□□□□ -1.79
SRRM1-215ENST00000488317 TBC1D10AQ9BXI6 508 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 NT5C3AQ9H0P0 336 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 RMND5AQ9H871 391 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 HEXA-AS1Q9H8Q6 139 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 B9D1Q9UPM9 204 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 UTP11Q9Y3A2 253 aaKnown RBP3.84□□□□□ -1.79
SRRM1-215ENST00000488317 SNED1Q8TER0 1413 aa3.84□□□□□ -1.79
SRRM1-215ENST00000488317 COL16A1Q07092 1604 aaPredicted RBP3.84□□□□□ -1.8
SRRM1-215ENST00000488317 ZSCAN5CA6NGD5 496 aaPredicted RBP3.83□□□□□ -1.8
SRRM1-215ENST00000488317 PP2D1A8MPX8 630 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 MIF4GDA9UHW6 222 aaKnown RBP3.83□□□□□ -1.8
SRRM1-215ENST00000488317 E7ENQ6 273 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 XPO1O14980 1071 aaKnown RBP3.83□□□□□ -1.8
SRRM1-215ENST00000488317 PPIHO43447 177 aaKnown RBP3.83□□□□□ -1.8
SRRM1-215ENST00000488317 TYROBPO43914 113 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 NOL4O94818 638 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 MT-ND1P03886 318 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 HCKP08631 526 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 ANXA3P12429 323 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 PSMA2P25787 234 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 EPS15P42566 896 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 BRCC3P46736 316 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 GSK3BP49841 420 aa3.83□□□□□ -1.8
SRRM1-215ENST00000488317 STK19P49842 368 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms