RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TUBB1Q9H4B7 451 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 TBK1Q9UHD2 729 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 POU2F3Q9UKI9 436 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 MGAT4BQ9UQ53 548 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 DTNAQ9Y4J8 743 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 KCNE3Q9Y6H6 103 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 NBEAL1Q6ZS30 2694 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 A0A1W2PPM1 405 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 ESPNB1AK53 854 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 ETV2O00321 342 aaPredicted RBP17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 RAD51DO75771 328 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 DHRS4L1P0CG22 281 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 NEFHP12036 1026 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 ZNF83P51522 516 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 CCR4P51679 360 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 C3orf33Q6P1S2 294 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 FBXL14Q8N1E6 418 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 TOR1AIP2Q8NFQ8 470 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 OR52N5Q8NH56 324 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 FAM168AQ92567 244 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 ACTRT3Q9BYD9 372 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 SHARPINQ9H0F6 387 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 FIS1Q9Y3D6 152 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 ANK2Q01484 3957 aa17.13■□□□□ 0.33
SMPDL3A-202ENST00000487215 H7C417 338 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 AZIN1O14977 448 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 LSM1O15116 133 aaKnown RBP17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 ZNF264O43296 627 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 PLIN3O60664 434 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 IGHV3-9P01782 118 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 IGHV4-31P0DP07 118 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 UBL4AP11441 157 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 PTAFRP25105 342 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 CD40P25942 277 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 ASMTP46597 345 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 FABP6P51161 128 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 TP53BP2Q13625 1128 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 TIGD2Q4W5G0 525 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 CYB5R2Q6BCY4 276 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 RNF165Q6ZSG1 346 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 R3HCC1LQ7Z5L2 792 aaKnown RBP17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 ARIH2OSQ8N7S6 290 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 ADAMTS15Q8TE58 950 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 C10orf105Q8TEF2 133 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 C19orf24Q9BVV8 132 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 QRSL1Q9H0R6 528 aaKnown RBP17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 GPATCH2Q9NW75 528 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 OXSMQ9NWU1 459 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 ATP6V1HQ9UI12 483 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 FAF1Q9UNN5 650 aaPredicted RBP17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 TMED5Q9Y3A6 229 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 SLC25A15Q9Y619 301 aa17.12■□□□□ 0.33
SMPDL3A-202ENST00000487215 SCAMP2O15127 329 aaKnown RBP17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 EIF4E2O60573 245 aaKnown RBP17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 LINC00032P0C843 101 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 BCKDHAP12694 445 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 THBS2P35442 1172 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 CCT3P49368 545 aaKnown RBP17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 DIO1P49895 249 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 CHRNEQ04844 493 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 CBFBQ13951 182 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 CCDC153Q494R4 210 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 GALNTL6Q49A17 601 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 LIPMQ5VYY2 423 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 FBXW9Q5XUX1 488 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 ABLIM2Q6H8Q1 611 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 KLHL17Q6TDP4 642 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 OR7A2PQ8NGA2 310 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 ARL8AQ96BM9 186 aa17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 C12orf65Q9H3J6 166 aaKnown RBP17.11■□□□□ 0.33
SMPDL3A-202ENST00000487215 IGKV3D-15A0A087WSY6 115 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 A0A1W2PR80 420 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 CIB4A0PJX0 185 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 LMX1BO60663 402 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 KRT16P08779 473 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 LAMP1P11279 417 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 DDX5P17844 614 aaKnown RBP17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 HPCAL1P37235 193 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 CCT5P48643 541 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 SRSF2Q01130 221 aaKnown RBP17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 TMPPEQ6ZT21 453 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 HOMEZQ8IX15 550 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 UBE2J2Q8N2K1 259 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 OR56A1Q8NGH5 318 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 PSMA8Q8TAA3 256 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 OR5P2Q8WZ92 322 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 PROX1Q92786 737 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 PPCSQ9HAB8 311 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 EMC3Q9P0I2 261 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 DNAJC15Q9Y5T4 150 aa17.1■□□□□ 0.33
SMPDL3A-202ENST00000487215 ALPK2Q86TB3 2170 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 SERINC4A6NH21 518 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 CCT8L1PA6NM43 557 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 M0R1B8 84 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 DNAJA2O60884 412 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 CPA3P15088 417 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 USF1P22415 310 aaPredicted RBP17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 IGFBP5P24593 272 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 SKP2Q13309 424 aa17.09■□□□□ 0.33
SMPDL3A-202ENST00000487215 PDK3Q15120 406 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms